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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank126Aligned Residues238
% Identity23%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   367..370.........380......... 390.........400..... ....410.........420.
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Query Sequence  SELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIREGAMC. . . . EEDFIEEAKVMMKLTH
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Template Sequence  ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH
Template Known Secondary structure  TTTTTTT



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   8.10.........20.........30.........40.........50.........60.......
 
   422.......430.........440.........450.........460.........470.........480.
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Query Sequence  PKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEGMEYLER
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Template Sequence  QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG. PLSVDTAINFTNQILDGIKHAHD
Template Known Secondary structure  TTB



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   68.70.........80.........90.........100... ......110.........120......
 
   482.......490.........500.........510.........520.........530.........540.
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Query Sequence  NSFIHRDLAARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFNYSRF
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Template Sequence  MRIVHRDIKPQNILIDSNKTLKIFDFGIA. . . . . . . . . . . . . . . KTVQYFSPEQAKGEAT
Template Known Secondary structure  TT






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   127..130.........140.........150..... ....160.........170.
 
   542.......550.........560.........570.........580.... .....590.......
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Query Sequence  SSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLH. . . . RPKLATKYLYEVM
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Template Sequence  DECTDIYSIGIVLYEMLV. GEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVI
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   187..190.........200.... .....210.........220.........230.........240.....
 
   598.600........ .610.........620.
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Query Sequence  LRCWQERPEGR. PSLEDLLRTIDEL
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Template Sequence  LRATEKDKANRYKTIQEMKDDLSSV
Template Known Secondary structure  T
SSTTTS
SST
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   246...250.........260.........270
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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