Job Description P24604 Confidence 100.00% Date Tue Jul 30 13:00:36 BST 2013 Rank 86 Aligned Residues 255 % Identity 37% Template c3v5qB_ PDB info PDB header:transferase/transferase inhibitor Chain: B: PDB Molecule:nt-3 growth factor receptor; PDBTitle: discovery of a selective trk inhibitor with efficacy in rodent cancer2 tumor models Resolution 2.20 Å

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		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.										.																		.
Query SS confidence																					.										.																		.
Query Sequence		W	E	I	N	P	S	E	L	T	F	M	R	E	L	G	S	G	L	F	.	G	V	V	R	L	G	K	W	R	.	A	Q	Y	K	V	A	I	K	A	I	R	E	G	A	M	C	E	.	E	D	F	I	E	E	A	K	V	M	M	K
Query Conservation																					.										.																		.
Alig confidence																					.										.																		.
Template Conservation
Template Sequence		Q	H	I	K	R	R	D	I	V	L	K	R	E	L	G	F	K	V	F	L	A	E	C	Y	N	L	S	P	T	K	D	K	M	L	V	A	V	K	A	L	K	D	P	T	L	A	A	R	K	D	F	Q	R	E	A	E	L	L	T	N
Template Known Secondary structure						G	G	G																		S			S	S	S	S											S
Template Predicted Secondary structure
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	H	P	K	L	V	Q	L	Y	G	V	C	T	Q	Q	K	P	I	Y	I	V	T	E	F	M	E	R	G	C	L	L	N	F	L	R	Q	R	Q	G	H	F	S	R	D	M	L	L	S	M	C	Q	D	V	C	E	G	M	E	Y
Query Conservation
Alig confidence																		.	.
Template Conservation																		.	.
Template Sequence		L	Q	H	E	H	I	V	K	F	Y	G	V	C	G	D	P	.	.	L	I	M	V	F	E	Y	M	K	H	G	D	L	N	K	F	L	R	A	H	G	P	E	L	G	L	S	Q	M	L	H	I	A	S	Q	I	A	S	G	M	V	Y
Template Known Secondary structure					T	T	B											.	.									T	T									T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610			.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	R	N	S	F	I	H	R	D	L	A	A	R	N	C	L	V	N	E	A	G	V	V	K	V	S	D	F	G	M	A	R	Y	V	L	D	D	Q	Y	T	S	S	S	G	A	K	F	P	V	K	W	C	P	P	E	V	F	N	Y
Query Conservation
Alig confidence																																					.	.	.	.	.
Template Conservation																																					.	.	.	.	.
Template Sequence		L	A	S	Q	H	F	V	H	R	D	L	A	T	R	N	C	L	V	G	A	N	L	L	V	K	I	G	D	F	G	M	D	V	Y	S	.	.	.	.	.	T	D	Y	Y	R	T	M	L	P	I	R	W	M	P	P	E	S	I	M	Y
Template Known Secondary structure					T	T				S			S	G	G	G					G	G	G												S	G	.	.	.	.	.	G	G		B				B		G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.						.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	I	F	T	E	G	R	M	P	F	E	K	N	T	N	Y	E	V	V	T	M	V	T	R	G	H	R	L	H	R	P	K	L	A	T	K	Y	L	Y	E	V	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	F	T	T	E	S	D	V	W	S	F	G	V	I	L	W	E	I	F	T	Y	G	K	Q	P	W	F	Q	L	S	N	T	E	V	I	E	C	I	T	Q	G	R	V	L	E	R	P	R	V	C	P	K	E	V	Y	D	V	M	L
Template Known Secondary structure																					T	T	T	S			T	T	T	T	S												T							T	T
Template Predicted Secondary structure
Template SS confidence
		745	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.
		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	W	Q	E	R	P	E	G	R	P	S	L	E	D	L	L	R	T	I	D	E	L	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	C	W	Q	R	E	P	Q	Q	R	L	N	I	K	E	I	Y	K	I	L	H	A	L	G	K
Template Known Secondary structure						S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		805	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D