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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank297Aligned Residues247
% Identity23%Templatec3utoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:twitchin; PDBTitle: twitchin kinase region from c.elegans (fn31-nl-kin-crd-ig26)
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   367..370.........380......... 390.........400...... ...410.........420....
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Query Sequence  SELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIREGAMCE. EDFIEEAKVMMKLTHPKL
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Template Sequence  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL
Template Known Secondary structure  GTTTTTT



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   154.....160.........170.........180.........190.........200.........210...
 
   425....430.........440.........450.........460.........470.........480....
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Query Sequence  VQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEGMEYLERNSF
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Template Sequence  VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY
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   214.....220.........230.........240.........250.........260.........270...
 
   485....490......... 500.........510.........520.........530.........540..
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Query Sequence  IHRDLAARNCLVNEA. . GVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFNYSRFS
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Template Sequence  VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG. . TAEFAAPEVAEGKPVG
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S..SGGG

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   274.....280.........290.........300.........310..... ....320.........330.
 
   543......550.........560.........570.........580....... ..590.........
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Query Sequence  SKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLHRPK. . . LATKYLYEVMLR
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Template Sequence  YYTDMWSVGVLSYILLS. GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK
Template Known Secondary structure  .S

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SGGGTTS
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   332.......340........ .350.........360.........370.........380.........390
 
   600.........610......
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Query Sequence  CWQERPEGRPSLEDLLR
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Template Conservation       
  
      
 
Template Sequence  LLLADPNTRMTIHQALE
Template Known Secondary structure  TS
SSGGGS

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   391........400.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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