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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank248Aligned Residues237
% Identity24%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   367..370.........380......... 390.........400 .........410......... 420
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Query Sequence  SELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIR. . . . EGAMCEEDFIEEAKVMMKL. T
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN
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TTTTT

TTTTT
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   353......360.........370.........380.........390.........400.........410..
 
   421........430.........440.........450.........460.........470.........480
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Query Sequence  HPKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEGMEYLE
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Template Sequence  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR. RFDEARARFYAAEIISALMFLH
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   413......420.........430.........440......... 450.........460.........470.
 
   481........490.........500.........510.........520.........530.........540
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Query Sequence  RNSFIHRDLAARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFNYSR
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Template Sequence  DKGIIYRDLKLDNVLLDHEGHCKLADFGMC. . . . . . . . . . KEGICGTPDYIAPEILQEML
Template Known Secondary structure  TT
B




GGG
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TT
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GGG

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   472.......480.........490.........500. ........510.........520.
 
   541........550.........560.........570.........580.........590.........600
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Query Sequence  FSSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLHRPKLATKYLYEVMLRC
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Template Sequence  YGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILND. EVVYPTWLHEDATGILKSF
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   531........540......... 550.........560......... 570.........580........
 
   601........610 ......
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Query Sequence  WQERPEGRPS. . . . . . LEDLLR
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Template Sequence  MTKNPTMRLGSLTQGGEHAILR
Template Known Secondary structure  T
SSGGGSTTSGGGT
TT
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   589590.........600.........610
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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