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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank45Aligned Residues238
% Identity26%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   372.......380......... 390.........400.........410.........420.........430
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Query Sequence  MRELGSGLFGVVRLGKWR. AQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGV
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Template Sequence  FKVRKLGSYGEVLLCKEKNGHSEKAIKVIKKKF. . HEEIYNEISLLKSLDHPNIIKLFDV
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   58.60.........70.........80.........90 .........100.........110.....
 
   431........440.........450.........460.........470.........480.........490
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Query Sequence  CTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEGMEYLERNSFIHRDLA
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Template Sequence  FEDKKYFYLVTEFYEGGELFEQIINRH. KFDECDAANIMKQILSGICYLHKHNIVHRDIK
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   134.....140.........150.........160 .........170.........180.........190..
 
   491..... ...500.........510.........520.........530.........540.......
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Query Sequence  ARNCLV. . . NEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFNYSRFSSKSDV
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Template Sequence  PENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR. . LGTAYYIAPEVLKK. KYNEKCDV
Template Known Secondary structure  GGGSSTT

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   193......200.........210.........220....... ..230.........240. ........
 
   548.550.........560.........570.........580....... ..590.........600....
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Query Sequence  WSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLHRPK. . . LATKYLYEVMLRCWQER
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Template Sequence  WSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYD
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   250.........260. ........270.........280.........290.........300........
 
   605....610......
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Query Sequence  PEGRPSLEDLLR
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Template Sequence  YNKRCTAEEALN
Template Known Secondary structure  TTTS

T
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   309310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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