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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank84Aligned Residues239
% Identity21%Templatec3p23B_
PDB info PDB header:hydrolase, transferaseChain: B: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the human kinase and rnase domains in complex2 with adp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   364.....370.........380. ........390.........400.........410......... 420.
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Query Sequence  INPSELTFMRELGSGLFG. VVRLGKWRAQYKVAIKAIREGAMCEEDFIEEAKVMMKL. TH
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Template Sequence  VGKISFCPKDVLGHGAEGTIVYRGMF. DNRDVAVKRILPECFSF. . ADREVQLLRESDEH
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B
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   566...570.........580.........590. ........600........ .610.........620..
 
   422.......430.........440.........450.........460.........470.........480.
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Query Sequence  PKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEGMEYLER
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Template Sequence  PNVIRYFCTEKDRQFQYIAIELCA. ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS
Template Known Secondary structure  TTB


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   623......630.........640...... ...650.........660.........670.........680.
 
   482.......490.........500. ........510.........520.........530......
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Query Sequence  NSFIHRDLAARNCLVNEAGV. . . . . VKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVF
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Template Sequence  LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAP. . . . . . . . . . GTEGWIAPEML
Template Known Secondary structure  TT





SGGG


BTTTB




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GGGG
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   682.......690.........700.........710.........720 .........730.
 
   537..540.........550.........560.........570......... 580.........590....
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Query Sequence  NYSRFSSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTR. . GHRLHRPKLATKYLY
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Template Sequence  SEENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIAR
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   744.....750.........760.........770.........780.........790.........800...
 
   595....600.........610......
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Query Sequence  EVMLRCWQERPEGRPSLEDLLR
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Template Sequence  ELIEKMIAMDPQKRPSAKHVLK
Template Known Secondary structure  T
SSGGG


T
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   807..810.........820........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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