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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank23Aligned Residues254
% Identity23%Templatec3nyoB_
PDB info PDB header:transferaseChain: B: PDB Molecule:g protein-coupled receptor kinase 6; PDBTitle: crystal structure of g protein-coupled receptor kinase 6 in complex2 with amp
Resolution2.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   360.........370.........380......... 390.........400 .........410....
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Query Sequence  DKWEINPSELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIR. . . . EGAMCEEDFIEEAK
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Template Sequence  ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ
Template Known Secondary structure  TS


GGG



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   177..180.........190.........200.........210.........220.........230......
 
   415....420.........430.........440.........450......... 460.........470...
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Query Sequence  VMMKLTHPKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGH. FSRDMLLSMCQDVC
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Template Sequence  ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC
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   237..240.........250.........260.........270.........280.........290......
 
   474.....480.........490.........500.........510.........520.........530...
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Query Sequence  EGMEYLERNSFIHRDLAARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPP
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Template Sequence  CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR. . VGTVGYMAP
Template Known Secondary structure  TT




GGG
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TT

B


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   297..300.........310.........320.........330.........340..... ....350....
 
   534.....540.........550.........560.........570.........580.........590...
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Query Sequence  EVFNYSRFSSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLHRPKLATKYL
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Template Sequence  EVVKNERYTFSPDWWALGCLLYEMIA. GQSPFQKKIKREEVERLVKEVPEEYSERFSPQA
Template Known Secondary structure  TT

BSST.SS
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   355....360.........370.........380 .........390.........400.........410...
 
   594.....600........ .610......
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Query Sequence  YEVMLRCWQERPEGR. . . . . PSLEDLLR
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Template Sequence  RSLCSQLLCKDPAERLGCRGGSAREVKE
Template Known Secondary structure  S
S
GGGSTTTTTTT
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   417..420.........430.........440....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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