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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank148Aligned Residues245
% Identity26%Templatec3ku2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of inactivated form of cdpk1 from toxoplasma gondii,2 tgme49.101440
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   367..370.........380......... 390.........400...... ...410.........420.
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Query Sequence  SELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIREGAMCE. . . . EDFIEEAKVMMKLTH
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Template Sequence  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH
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   4950.........60.........70.........80.........90.........100........
 
   422.......430.........440.........450.........460.........470.........480.
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Query Sequence  PKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEGMEYLER
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Template Sequence  PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK. RFSEVDAARIIRQVLSGITYMHK
Template Known Secondary structure  TTB


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S
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   109110.........120.........130.........140.... .....150.........160.......
 
   482.......490...... ...500.........510.........520.........530........
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Query Sequence  NSFIHRDLAARNCLV. . . NEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFNY
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Template Sequence  NKIVHRDLKPENLLLESKSKDANIRIIDFGLST. . HFEASKKMKDKIGTAYYIAPEVLH.
Template Known Secondary structure  TT


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   168.170.........180.........190.........200 .........210.........220....
 
   539540.........550.........560.........570.........580. ........590.....
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Query Sequence  SRFSSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGH. . . RLHRPKLATKYLYE
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Template Sequence  GTYDEKCDVWSTGVILYILLS. GCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD
Template Known Secondary structure  S


T.SS
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SGGGGGS
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   225....230.........240..... ....250.........260.........270.........280...
 
   596...600.........610......
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Query Sequence  VMLRCWQERPEGRPSLEDLLR
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Template Sequence  LIRKMLTYVPSMRISARDALD
Template Known Secondary structure  T
SSTTTS

T
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   284.....290.........300....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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