Job Description P24604 Confidence 100.00% Date Tue Jul 30 13:00:36 BST 2013 Rank 300 Aligned Residues 223 % Identity 24% Template c3kn5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal protein s6 kinase alpha-5; PDBTitle: crystal structure of the c-terminal kinase domain of msk1 in complex2 with amp-pnp Resolution 2.40 Å

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		366	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure									.	.	.																		.																																.
Query SS confidence									.	.	.																		.																																.
Query Sequence		P	S	E	L	T	F	M	.	.	.	R	E	L	G	S	G	L	F	G	V	V	R	L	G	K	W	R	.	A	Q	Y	K	V	A	I	K	A	I	R	E	G	A	M	C	E	E	D	F	I	E	E	A	K	V	M	M	K	L	T	.
Query Conservation									.	.	.																		.																																.
Alig confidence									.	.	.																		.													.	.																		.
Template Conservation																																										.	.
Template Sequence		Y	Q	H	Y	D	L	D	L	K	D	K	P	L	G	E	G	S	F	S	I	C	R	K	C	V	H	K	K	S	N	Q	A	F	A	V	K	I	I	S	K	.	.	R	M	E	A	N	T	Q	K	E	I	T	A	L	K	L	C	E	G
Template Known Secondary structure									S	S	S			S	B			T	T									T	T	T	T										G	.	.	G	G														T	T	T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.			460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	K	L	V	Q	L	Y	G	V	C	T	Q	Q	K	P	I	Y	I	V	T	E	F	M	E	R	G	C	L	L	N	F	L	R	Q	R	Q	G	H	F	S	R	D	M	L	L	S	M	C	Q	D	V	C	E	G	M	E	Y	L	E
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		H	P	N	I	V	K	L	H	E	V	F	H	D	Q	L	H	T	F	L	V	M	E	L	L	N	G	G	E	L	F	E	R	I	K	K	K	K	.	H	F	S	E	T	E	A	S	Y	I	M	R	K	L	V	S	A	V	S	H	M	H
Template Known Secondary structure			T	T	B										S	S											S		B							T		S	.			B
Template Predicted Secondary structure																																							.
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.		.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	S	F	I	H	R	D	L	A	A	R	N	C	L	V	N	E	A	G	V	V	K	V	S	D	F	G	M	A	R	Y	V	L	D	D	Q	Y	T	S	S	S	G	A	K	F	P	V	K	W	C	P	P	E	V	F	N	Y	S	R
Query Conservation
Alig confidence																		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	G	V	V	H	R	D	L	K	P	E	N	L	L	F	.	T	D	L	E	I	K	I	I	D	F	G	F	A	R	L	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	G
Template Known Secondary structure			T	T								G	G	G				.											T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.		.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.																								570	.	.
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.								570	.	.	.	.	.	.	.	.	.	580	.				.	.	.	.	.	.	.	.	590
Predicted Secondary structure																															.	.	.	.	.	.	.													.	.	.
Query SS confidence																															.	.	.	.	.	.	.													.	.	.
Query Sequence		F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	I	F	T	E	G	R	M	P	F	E	K	N	T	.	.	.	.	.	.	.	N	Y	E	V	V	T	M	V	T	R	G	H	.	.	.	R	L	H	R	P	K	L	A	T
Query Conservation																															.	.	.	.	.	.	.													.	.	.
Alig confidence																					.										.	.	.	.	.	.	.													.	.	.
Template Conservation																					.
Template Sequence		Y	D	E	S	C	D	L	W	S	L	G	V	I	L	Y	T	M	L	S	.	G	Q	V	P	F	Q	S	H	D	R	S	L	T	C	T	S	A	V	E	I	M	K	K	I	K	K	G	D	F	S	F	E	G	E	A	W	K	N	V	S
Template Known Secondary structure				T																	.	S			T	T			S	S		S	S															T						S	T	T	T	S	S
Template Predicted Secondary structure																					.
Template SS confidence
		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.		.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.
		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	L	Y	E	V	M	L	R	C	W	Q	E	R	P	E	G	R	P	S	L	E	D	L	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	A	K	D	L	I	Q	G	L	L	T	V	D	P	N	K	R	L	K	M	S	G	L	R	Y
Template Known Secondary structure															S	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		658	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D