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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank151Aligned Residues228
% Identity30%Templatec3is5E_
PDB info PDB header:transferaseChain: E: PDB Molecule:calcium-dependent protein kinase; PDBTitle: crystal structure of cdpk kinase domain from toxoplasma gondii,2 tgme49_018720
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   367..370.........380......... 390.........400.. .......410.........420...
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Query Sequence  SELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIREG. . AMCEEDFIEEAKVMMKLTHPK
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Template Sequence  DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN
Template Known Secondary structure 
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TTT

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   133......140.........150.........160.........170.........180.........190..
 
   424.....430.........440.........450...... ...460.........470.........480
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Query Sequence  LVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQR. . . QGHFSRDMLLSMCQDVCEGMEYLE
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Template Sequence  IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH
Template Known Secondary structure  B


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   193......200.........210.........220.........230.........240.........250..
 
   481........490........ .500.........510.........520.........530.......
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Query Sequence  RNSFIHRDLAARNCLVNE. . . AGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFN
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Template Sequence  SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE. . . . . . . . . . . . . LFKALYMAPEVFK
Template Known Secondary structure  TT


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GG.............GB

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GGGGG
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   253......260.........270.........280...... ...290.........
 
   538.540.........550.........560.........570.........580.........590.......
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Query Sequence  YSRFSSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLHRPKLATKYLYEVM
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Template Sequence  . RDVTFKCDIWSAGVVMYFLLT. GCLPFTGTSLEEVQQKAT. . . . . . . YKPLTPQAVDLL
Template Known Secondary structure  .T


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   311........320.........330. ........340......... 350.........360.
 
   598.600.........610......
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Query Sequence  LRCWQERPEGRPSLEDLLR
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Template Sequence  KQMLTKDPERRPSAAQVLH
Template Known Secondary structure  T
SSTTSS

T
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   371........380.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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