Job Description P24604 Confidence 100.00% Date Tue Jul 30 13:00:36 BST 2013 Rank 20 Aligned Residues 265 % Identity 35% Template c3g0eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:mast/stem cell growth factor receptor; PDBTitle: kit kinase domain in complex with sunitinib Resolution 1.60 Å Model Dimensions (Å) X:56.980 Y:59.456 Z:40.443

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		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.							390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.			.	.	.	410	.
Predicted Secondary structure																																.	.	.	.	.	.																		.	.
Query SS confidence																																.	.	.	.	.	.																		.	.
Query Sequence		D	K	W	E	I	N	P	S	E	L	T	F	M	R	E	L	G	S	G	L	F	G	V	V	R	L	G	K	W	R	.	.	.	.	.	.	A	Q	Y	K	V	A	I	K	A	I	R	E	G	A	M	C	E	.	.	E	D	F	I	E
Query Conservation																																.	.	.	.	.	.																		.	.
Alig confidence																																.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		H	K	W	E	F	P	R	N	R	L	S	F	G	K	T	L	G	A	G	A	F	G	K	V	V	E	A	T	A	Y	G	L	I	K	S	D	A	A	M	T	V	A	V	K	M	L	K	P	S	A	H	L	T	E	R	E	A	L	M	S
Template Known Secondary structure		G	G	G	B			G	G	G											S	S										S	S	S	S	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
		412	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure										.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	K	V	M	M	K	L	.	T	H	P	K	L	V	Q	L	Y	G	V	C	T	Q	Q	K	P	I	Y	I	V	T	E	F	M	E	R	G	C	L	L	N	F	L	R	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	K	V	L	S	Y	L	G	N	H	M	N	I	V	N	L	L	G	A	C	T	I	G	G	P	T	L	V	I	T	E	Y	C	C	Y	G	D	L	L	N	F	L	R	R	K	R	D	S	F	I	C	S	K	T	S	P	A	I	M
Template Known Secondary structure													T	T	B									S	S	S	S									T	T		B									G	G	G	G	S		S	S	S					B
Template Predicted Secondary structure
Template SS confidence
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
					457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	Q	G	H	F	S	R	D	M	L	L	S	M	C	Q	D	V	C	E	G	M	E	Y	L	E	R	N	S	F	I	H	R	D	L	A	A	R	N	C	L	V	N	E	A	G	V	V	K	V	S	D	F	G	M	A	R	Y	V
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		E	D	D	E	L	A	L	D	L	E	D	L	L	S	F	S	Y	Q	V	A	K	G	M	A	F	L	A	S	K	N	C	I	H	R	D	L	A	A	R	N	I	L	L	T	H	G	R	I	T	K	I	C	D	F	G	L	A	R	D	I
Template Known Secondary structure		T	T	B																										T	T				S			S	G	G	G					T	T	T								G	G	G			G
Template Predicted Secondary structure
Template SS confidence
		758	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.
		514	.	.	.	.	.	520	.	.	.	.	.	.		.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.		570	.
Predicted Secondary structure															.																																												.
Query SS confidence															.																																												.
Query Sequence		L	D	D	Q	Y	T	S	S	S	G	A	K	F	.	P	V	K	W	C	P	P	E	V	F	N	Y	S	R	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	I	F	T	E	G	R	M	P	F	E	K	N	T	.	N	Y
Query Conservation															.																																												.
Alig confidence															.																																												.
Template Conservation
Template Sequence		K	N	D	S	N	Y	V	V	K	G	N	A	R	L	P	V	K	W	M	A	P	E	S	I	F	N	C	V	Y	T	F	E	S	D	V	W	S	Y	G	I	F	L	W	E	L	F	S	L	G	S	S	P	Y	P	G	M	P	V	D	S
Template Known Secondary structure		G	G		T	T	S				T	T					G	G	G	S								T																				T	T	T			S	S	T	T				S
Template Predicted Secondary structure
Template SS confidence
		818	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.
		572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	V	T	M	V	T	R	G	H	R	L	H	R	P	K	L	A	T	K	Y	L	Y	E	V	M	L	R	C	W	Q	E	R	P	E	G	R	P	S	L	E	D	L	L	R	T	I	D	E	L	V	E	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	Y	K	M	I	K	E	G	F	R	M	L	S	P	E	H	A	P	A	E	M	Y	D	I	M	K	T	C	W	D	A	D	P	L	K	R	P	T	F	K	Q	I	V	Q	L	I	E	K	Q	I	S	E
Template Known Secondary structure									T	T							T	T													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		878	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D