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Job DescriptionP24604
Confidence99.78%DateTue Jul 30 13:00:36 BST 2013
Rank392Aligned Residues135
% Identity20%Templatec3ek7A_
PDB info PDB header:fluorescent proteinChain: A: PDB Molecule:myosin light chain kinase, green fluorescent protein, PDBTitle: calcium-saturated gcamp2 dimer
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   477..480.........490...... ...500... ......510.........520.....
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Query Sequence  EYLERNSFIHRDLAARNCLV. . . NEAGVVK. . . . . . . . VSDFGMARYVLDDQYTSSSGAK
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Template Sequence  KTGHAVRAIGRLSSLENVYIMADKQKNGIKANFKIRHNIEDGGVQLAYHYQQNTPIG. . D
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   46...50.........60.........70.........80.........90.........100.. .
 
   526.. .530.........540...... ...550...... ...560.........
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Query Sequence  FPV. . . . . . KWCPPEVFNYSRFSSKSD. . . . . . . VWSFGVLMWE. . . IFTEGRMPFEKNT
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Template Sequence  GPVLLPDNHYLSTQSKLS. KDPNEKRDHMVLLEFVTAAGITLSKGEELFT. GVVPILVEL
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   104.....110.........120. ........130.........140.........150.. .......160.
 
   570... ...... 580.........590.........600.........610.....
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Query Sequence  NYEV. VTMVTR. . . GHRLHRPKLATKYLYEVMLRCWQERPEGRPSLEDLL
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Template Sequence  DGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLVQCF
Template Known Secondary structure  TTTTTTTTSS
SS
GGGGTTT

GGG
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   177..180.........190.........200.........210.........220......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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