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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank146Aligned Residues239
% Identity33%Templatec3dtcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 9; PDBTitle: crystal structure of mixed-lineage kinase mlk1 complexed2 with compound 16
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   362.......370.........380.........390.........400.........410.........420.
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Query Sequence  WEINPSELTFMRELGSGLFGVVRLGKWRAQYKVAIKAIREGAMCEEDFIEEAKVMMKLTH
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Template Sequence  LEIDFAELTLEEIIGIGGFGKVYRAFWI. GDEVAVKAAT. . . . . IENVRQEAKLFAMLKH
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   137..140.........150.........160.... .....170.... .....180.........190
 
   422.......430.........440.........450.........460.........470.........480.
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Query Sequence  PKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEGMEYLER
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Template Sequence  PNIIALRGVCLKEL. . CLVMEFARGGPLNRVLSGKR. . IPPDILVNWAVQIARGMNYLHD
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   201........210.... .....220.........230.... .....240.........250......
 
   482. ......490.........500.........510.........520.........530........
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Query Sequence  NS. . . FIHRDLAARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFNY
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Template Sequence  EAIVPIIHRDLKSSNILILQKVENGDLSNKILKI. . . . . . . . TDFGLGAYAWMAPEVIRA
Template Known Secondary structure  SSSS



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SGGGSS

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GGGS
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   259260.........270.........280.........290.. .......300.........310
 
   539540.........550.........560.........570.........580. ........590.......
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Query Sequence  SRFSSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGH. RLHRPKLATKYLYEVM
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Template Sequence  SMFSKGSDVWSYGVLLWELLT. GEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLM
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TTTTS
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   324.....330.........340.... .....350.........360.........370.........380..
 
   598.600.........610.........
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Query Sequence  LRCWQERPEGRPSLEDLLRTID
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Template Sequence  EDCWNPDPHSRPSFTNILDQLT
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SSGGGS

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   383......390.........400....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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