Job Description P24604 Confidence 99.41% Date Tue Jul 30 13:00:36 BST 2013 Rank 496 Aligned Residues 82 % Identity 24% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	L	D	Q	Y	E	W	Y	C	R	N	T	N	R	S	K	A	E	Q	L	L	R	T	E	D	K	E	G	G	F	M	V	R	D	S	S	Q	P	G	L	Y	T	V	S	L	Y	T	K	F	G	G	E	G	S	S	G	F	R	H
Query Conservation
Alig confidence												.														.	.																							.	.	.	.	.
Template Conservation												.														.	.																							.	.	.	.	.
Template Sequence		P	R	F	Y	K	H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	.	S	T	D	D	F	L	I	R	K	G	S	R	H	G	Y	C	V	L	V	I	K	F	.	.	.	.	.	A	S	D	V	F	V	H
Template Known Secondary structure			G	G	G	G	S	T	T			.														.	.	S	S									S	S	T	T									.	.	.	.	.		T	T
Template Predicted Secondary structure												.														.	.																							.	.	.	.	.
Template SS confidence
		787	.	.	790	.	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.			810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.						.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	I	K	E	T	A	T	S	P	K	K	Y	Y	L	A	E	K	H	A	F	G	S	I	P	E	I	I	E	Y	H	K	H	N
Query Conservation
Alig confidence								.	.	.	.
Template Conservation								.	.	.	.
Template Sequence		M	K	I	E	E	H	.	.	.	.	S	E	H	Y	T	C	S	N	K	H	F	E	D	I	D	E	V	I	S	V	Y	V	R	P
Template Known Secondary structure								.	.	.	.	S	S					T	T				S	S								T
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		839	840	.	.	.	.					.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D