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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank207Aligned Residues244
% Identity23%Templatec2qr8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-3; PDBTitle: 2.0a x-ray structure of c-terminal kinase domain of p90 ribosomal s62 kinase 2 (rsk2)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   367..370.........380......... 390.........400.........410........ .420....
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Query Sequence  SELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIREGAMCEEDFIEEAKVMMK. LTHPKL
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Template Sequence  DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS. . . KRDPTEEIEILLRYGQHPNI
Template Known Secondary structure  TT
SSTTTTTT...T

TTTSTTB
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   420.........430.........440.........450...... ...460.........470......
 
   425....430.........440.........450.........460.........470.........480....
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Query Sequence  VQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEGMEYLERNSF
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Template Sequence  ITLKDVYDDGKYVYVVTELMKGGELLDKILRQK. FFSEREASAVLFTITKTVEYLHAQGV
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SS


S
BT
T.T

TT
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   477..480.........490.........500......... 510.........520.........530.....
 
   485....490.........500 .........510.........520.........530.........540
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Query Sequence  IHRDLAARNCLVNEAG. . . . VVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFNYSR
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Template Sequence  VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN. FVAPEVLERQG
Template Known Secondary structure 
S


GGGSSSS

GGG


TT

B
TTS
B

SS


S.


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   536...540.........550.........560.........570.........580... ......590....
 
   541........550.........560.........570 .........580..... ....590....
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Query Sequence  FSSKSDVWSFGVLMWEIFTEGRMPFEKNTN. . . YEVVTMVTRGHRLHR. . . PKLATKYLY
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Template Sequence  YDAACDIWSLGVLLYTMLT. GYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK
Template Known Secondary structure  .SS
SS
SSTTS
T



SSTS
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   595....600.........610... ......620.........630.........640.........650...
 
   595....600.........610......
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Query Sequence  EVMLRCWQERPEGRPSLEDLLR
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Template Sequence  DLVSKMLHVDPHQRLTAALVLR
Template Known Secondary structure  S
SSTTTS

T
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   654.....660.........670.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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