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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank236Aligned Residues269
% Identity26%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.........380.........390.........400...... ...410......
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Query Sequence  SYDKWEINPSELTFMRELGSGLFGVVRLGKWRAQYKVAIKAIREGAMCE. EDFIEEAKVM
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Template Sequence  PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETL
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S



S
B
SSS
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S

SSGG
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   30.........40.........50.........60.........70.........80.........
 
   417..420.........430.........440.........450......... 460.........470...
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Query Sequence  MKLTHPKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGH. . . FSRDMLLSMCQDVC
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Template Sequence  SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA
Template Known Secondary structure  GS


TTB




TT



TT
BTGGGSSSS


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   90.........100.........110.........120.........130.........140.........
 
   474.....480.........490.........500.........510.........520.........530...
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Query Sequence  EGMEYLERNSFIHRDLAARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPP
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Template Sequence  RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLVVKGTLG. YIDP
Template Known Secondary structure  TT
S


STT
TT




TT

SSSS






S
TT.T

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   150.........160.........170.........180.........190.........200.... ....
 
   534.....540.........550.........560.........570.........
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Query Sequence  EVFNYSRFSSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTR. . . . . . . . . . . . . .
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Template Sequence  EYFIKGRLTEKSDVYSFGVVLFEVLC. ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV
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T.

TT
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TTTT


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   211........220.........230...... ...240.........250.........260.........
 
   580.........590.........600.........610.........620........
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Query Sequence  . . GHRLHRPKLATKYLYEVMLRCWQERPEGRPSLEDLLRTIDELVECEETF
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Template Sequence  DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESV
Template Known Secondary structure  SSS
TT
S
T
SSGGGS

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   270.........280.........290.........300.........310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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