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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank296Aligned Residues229
% Identity22%Templatec2qkrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cdc2-like cdk2/cdc28 like protein kinase; PDBTitle: cryptosporidium parvum cyclin-dependent kinase cgd5_25102 with indirubin 3'-monoxime bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   371........380.........390.........400.........410.........420.........430
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Query Sequence  FMRELGSGLFGVVRLGKWRAQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHPKLVQLYGV
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Template Sequence  MEKYLEKVGEGVVYKAKDS. QRIVALKRIS. . . . . . . TAIREISLLKELHHPNIVSLIDV
Template Known Secondary structure  S
B


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   20.........30........ .40........ .50.........60.........70.
 
   431........440.........450.........460.........470.........480.........490
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Query Sequence  CTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEGMEYLERNSFIHRDLA
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Template Sequence  IHSECL. TLVFEFMEKDLKKVLDENKT. GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK
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S
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   88.90... ......100.........110... ......120.........130.........140.....
 
   491........500.........510.........520.........530.........540.........550
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Query Sequence  ARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFNYSRFSSKSDVWSF
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Template Sequence  PQNLLI. NSDALKLADFGLARAFGIPVRVVTLWY. . . . . RAPDVLMGSKKYSTSVDIWSI
Template Known Secondary structure  GGG.






TT
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T
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   147..150.. .......160.........170......... 180.........190.........200
 
   551........560.........570.........580....
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Query Sequence  GVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLH. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GCIFAEMIT. GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKP
Template Known Secondary structure  .SS
S


SSGGG



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TTGGGSS






B

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   207..210..... ....220.........230.........240.........250.........260.....
 
   585....590.........600.........610......
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Query Sequence  . . . RPKLATKYLYEVMLRCWQERPEGRPSLEDLLR
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Template Sequence  WSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN
Template Known Secondary structure  STT

S
S
TTTS

T
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   266...270.........280.........290.........300
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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