Job Description P24604 Confidence 100.00% Date Tue Jul 30 13:00:36 BST 2013 Rank 18 Aligned Residues 264 % Identity 36% Template c2ivsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase receptor PDBTitle: crystal structure of non-phosphorylated ret tyrosine kinase2 domain Resolution 2.00 Å Model Dimensions (Å) X:49.618 Y:57.755 Z:41.529

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		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.							390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.			.	.	.	410	.
Predicted Secondary structure																																.	.	.	.	.	.																		.	.
Query SS confidence																																.	.	.	.	.	.																		.	.
Query Sequence		D	K	W	E	I	N	P	S	E	L	T	F	M	R	E	L	G	S	G	L	F	G	V	V	R	L	G	K	W	R	.	.	.	.	.	.	A	Q	Y	K	V	A	I	K	A	I	R	E	G	A	M	C	E	.	.	E	D	F	I	E
Query Conservation																																.	.	.	.	.	.																		.	.
Alig confidence																																.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		P	K	W	E	F	P	R	K	N	L	V	L	G	K	T	L	G	E	G	E	F	G	K	V	V	K	A	T	A	F	H	L	K	G	R	A	G	Y	T	T	V	A	V	K	M	L	K	E	N	A	S	P	S	E	L	R	D	L	L	S
Template Known Secondary structure		T	T	T	B			G	G	G											S	S	S									T	G	G	G		S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		715	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.								.	.	460	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.
Query Sequence		E	A	K	V	M	M	K	L	T	H	P	K	L	V	Q	L	Y	G	V	C	T	Q	Q	K	P	I	Y	I	V	T	E	F	M	E	R	G	C	L	L	N	F	L	R	Q	R	Q	.	.	.	.	.	.	.	G	H	F	S	R	D	M
Query Conservation																																																.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	N	V	L	K	Q	V	N	H	P	H	V	I	K	L	Y	G	A	C	S	Q	D	G	P	L	L	L	I	V	E	Y	A	K	Y	G	S	L	R	G	F	L	R	E	S	R	K	V	G	P	G	Y	L	R	A	L	T	M	G	D
Template Known Secondary structure							T	T				T	T	B									S	S	S	S									T	T		B								T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		775	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.		.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		L	L	S	M	C	Q	D	V	C	E	G	M	E	Y	L	E	R	N	S	F	I	H	R	D	L	A	A	R	N	C	L	V	N	E	A	G	V	V	K	V	S	D	F	G	M	A	R	Y	.	V	L	D	D	Q	Y	T	S	S	S	G
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		L	I	S	F	A	W	Q	I	S	Q	G	M	Q	Y	L	A	E	M	K	L	V	H	R	D	L	A	A	R	N	I	L	V	A	E	G	R	K	M	K	I	S	D	F	G	L	S	R	D	V	Y	E	E	D	S	Y	V	K	R	S	Q
Template Known Secondary structure																			T	T							S	G	G	G					T	T	T								T	T					T	T	T	S					S	S
Template Predicted Secondary structure
Template SS confidence
		851	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	F	P	V	K	W	C	P	P	E	V	F	N	Y	S	R	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	I	F	T	E	G	R	M	P	F	E	K	N	T	N	Y	E	V	V	T	M	V	T	R	G	H	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	I	P	V	K	W	M	A	I	E	S	L	F	D	H	I	Y	T	T	Q	S	D	V	W	S	F	G	V	L	L	W	E	I	V	T	L	G	G	N	P	Y	P	G	I	P	P	E	R	L	F	N	L	L	K	T	G	H	R	M
Template Known Secondary structure				S		G	G	G																													T	T	S			S	S	T	T			G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		911	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970
		584	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	P	K	L	A	T	K	Y	L	Y	E	V	M	L	R	C	W	Q	E	R	P	E	G	R	P	S	L	E	D	L	L	R	T	I	D	E	L	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	P	D	N	C	S	E	E	M	Y	R	L	M	L	Q	C	W	K	Q	E	P	D	K	R	P	V	F	A	D	I	S	K	D	L	E	K	M	M	V
Template Known Secondary structure					T	T													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		971	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D