Job Description P24604 Confidence 99.63% Date Tue Jul 30 13:00:36 BST 2013 Rank 437 Aligned Residues 102 % Identity 20% Template c2dtcB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:ral guanine nucleotide exchange factor ralgps1a; PDBTitle: crystal structure of ms0666 Resolution 1.70 Å

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		5	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.
Predicted Secondary structure												.	.	.																																	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.																																	.	.	.	.	.	.	.	.
Query Sequence		T	I	L	E	E	I	L	I	K	R	.	.	.	S	Q	Q	K	K	K	T	S	L	L	N	Y	K	E	R	L	C	V	L	P	K	S	V	L	S	Y	Y	E	G	R	A	E	.	.	.	.	.	.	.	.	K	K	Y	R	K	G	V
Query Conservation												.	.	.																																	.	.	.	.	.	.	.	.
Alig confidence												.	.	.										.																							.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		P	T	X	E	G	P	L	R	R	K	T	L	L	K	E	G	R	K	P	A	L	S	.	S	W	T	R	Y	W	V	V	L	S	G	A	T	L	L	Y	Y	G	A	K	S	L	R	G	T	D	R	K	H	Y	K	S	T	P	G	K	K
Template Known Secondary structure															B	T	T	B			S			.											T	T							B	S	S	S	S			S	G	G	G	B		S	S		S
Template Predicted Secondary structure																								.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		I	D	I	S	K	I	K	C	V	E	I	V	K	N	D	D	G	V	I	P	C	Q	N	K	F	P	F	Q	V	V	H	.	.	D	A	N	T	L	Y	I	F	A	P	S	P	Q	S	R	D	R	W	V	K	K	L	K	E	E	I	K
Query Conservation																																	.	.
Alig confidence														.	.	.	.	.	.	.													.	.
Template Conservation														.	.	.	.	.	.	.
Template Sequence		V	S	I	V	G	W	X	V	Q	L	P	D	.	.	.	.	.	.	.	D	P	E	H	P	D	I	F	Q	L	N	N	P	D	K	G	N	V	Y	K	F	Q	T	G	S	R	F	H	A	I	L	W	H	K	H	L	D	D	A	C	K
Template Known Secondary structure					T	T								.	.	.	.	.	.	.		T	T	S	T	T							T	T	S		S							S	S																T
Template Predicted Secondary structure														.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.								.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		112	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	R
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		113	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D