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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank83Aligned Residues236
% Identity29%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   361........370.........380......... 390.........400 .........410.....
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Query Sequence  KWEINPSELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIR. . . . EGAMCEEDFIEEAKV
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI
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G..GG
SSTTT

TT
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   127..130 .........140.........150.........160.........170.........180....
 
   416...420.........430.........440.........450.........460.........470.....
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Query Sequence  MMKLTHPKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEG
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Template Sequence  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS. KFDEQRTATYITELANA
Template Known Secondary structure  TT


TTB


SS


TT
BS.S

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   185....190.........200.........210.........220...... ...230.........240...
 
   476...480.........490.........500.........510.........520.........530.....
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Query Sequence  MEYLERNSFIHRDLAARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEV
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Template Sequence  LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . . . . . . . . . . . . . . VTLDYLPPEM
Template Known Secondary structure  TTT




GGG
TTS

S

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GGG

GGG
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   244.....250.........260.........270........ .280........
 
   536...540.........550.........560.........570.........580.........590.....
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Query Sequence  FNYSRFSSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLHRPKLATKYLYE
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Template Sequence  IEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRV. EFTFPDFVTEGARD
Template Known Secondary structure  TTTTSSGGG.SS
TT

SSTT.




TTS
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   301........310.........320.... .....330.........340.... .....350........
 
   596...600.........610......
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Query Sequence  VMLRCWQERPEGRPSLEDLLR
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Template Sequence  LISRLLKHNPSQRPMLREVLE
Template Known Secondary structure  S
SSGGGS

T
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   359360.........370.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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