Job Description P24604 Confidence 99.86% Date Tue Jul 30 13:00:36 BST 2013 Rank 355 Aligned Residues 160 % Identity 19% Template c2b3oA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: crystal structure of human tyrosine phosphatase shp-1 Resolution 2.80 Å

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.																				220	.
Predicted Secondary structure																														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	V	A	M	Y	D	F	Q	A	T	E	A	H	D	L	R	L	E	R	G	Q	E	Y	I	I	L	E	.	K	N	D	L	H	W	W	R	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K
Query Conservation																														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	L	A	R	P	S	R	K	N	Q	G	D	F	S	L	S	V	R	V	G	D	Q	V	T	H	I	R	I	Q	N	S	G	D	F	Y	D	L	Y	G	G	E	K	F	A	T	L	T	E	L	V	E	Y	Y	T	Q	Q	Q	G	V
Template Known Secondary structure									S	S	S	S	S									T	T										S	S	S					T	T	S				S											T	T		S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		Y	G	S	E	G	Y	I	P	S	N	Y	V	T	G	K	K	S	N	N	L	D	Q	Y	E	W	Y	C	R	N	T	N	R	S	K	A	E	Q	L	L	R	T	E	D	K	E	G	G	F	M	V	R	D	S	.	S	Q	P	G	L	Y
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		L	Q	D	R	D	G	T	I	I	H	L	K	Y	P	L	N	C	S	D	P	T	S	E	R	W	Y	H	G	H	M	S	G	G	Q	A	E	T	L	L	Q	A	K	G	E	P	W	T	F	L	V	R	E	S	L	S	Q	P	G	D	F
Template Known Secondary structure		B			S	S	S			B											G	G	G		T	T	B		T	T																T	T								S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		T	V	S	L	Y	T	K	F	G	G	E	G	S	S	G	F	R	H	Y	H	I	K	E	T	A	T	S	P	K	K	Y	Y	L	A	E	K	H	A	F	G	S	I	P	E	I	I	E	Y	H	K	H	N	.	.	.	.	A	A	G	L
Query Conservation																																																						.	.	.	.
Alig confidence													.											.	.	.																												.	.	.	.
Template Conservation													.											.	.	.
Template Sequence		V	L	S	V	L	S	D	Q	P	K	S	.	P	L	R	V	T	H	I	K	V	M	.	.	.	C	E	G	G	R	Y	T	V	G	G	L	E	T	F	D	S	L	T	D	L	V	E	H	F	K	K	T	G	I	E	E	A	S	G	A
Template Known Secondary structure													.										B	.	.	.			T	T	S	B	B	S	S	S	S			B	S	S																S	S	S
Template Predicted Secondary structure													.											.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		337	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	R	L	R	Y	P	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	Y	L	R	Q	P	Y	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D