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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank21Aligned Residues253
% Identity23%Templatec2acxB_
PDB info PDB header:transferaseChain: B: PDB Molecule:g protein-coupled receptor kinase 6; PDBTitle: crystal structure of g protein coupled receptor kinase 6 bound to2 amppnp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   360.........370.........380......... 390.........400 .........410....
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Query Sequence  DKWEINPSELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIR. . . . EGAMCEEDFIEEAK
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Template Sequence  ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ
Template Known Secondary structure  TS


GGGTTTTT

TT
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   177..180.........190.........200.........210.........220.........230......
 
   415....420.........430.........440.........450.........460.........470....
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Query Sequence  VMMKLTHPKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCE
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Template Sequence  ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMA. GFPEARAVFYAAEICC
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TTB


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   237..240.........250.........260.........270......... 280.........290.....
 
   475....480.........490.........500.........510.........520.........530....
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Query Sequence  GMEYLERNSFIHRDLAARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPE
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Template Sequence  GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR. . VGTVGYMAPE
Template Known Secondary structure  TT



SGGG
TTS



TT


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   298.300.........310.........320.........330.........340..... ....350.....
 
   535....540.........550.........560.........570.........580.........590....
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Query Sequence  VFNYSRFSSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLHRPKLATKYLY
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Template Sequence  VVKNERYTFSPDWWALGCLLYEMIA. GQSPFQQKIKREEVERLVKEVPEEYSERFSPQAR
Template Known Secondary structure  TT
SS.SS
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   356...360.........370.........380 .........390.........400.........410....
 
   595....600........ .610......
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Query Sequence  EVMLRCWQERPEGR. . . . . PSLEDLLR
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Template Sequence  SLCSQLLCKDPAERLGCRGGSAREVKE
Template Known Secondary structure  S
SSGGGSTTSSSSTT
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   418.420.........430.........440....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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