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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank138Aligned Residues248
% Identity22%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   364.....370.........380......... 390.........400 .........410........
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Query Sequence  INPSELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIR. . . . EGAMCEEDFIEEAKVMMK
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ
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STT
SSTTT

GGG

STTTTT
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   240.........250.........260.........270.........280.........290.........
 
   419420.........430.........440.........450.........460.........470.......
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Query Sequence  . LTHPKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEGME
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Template Sequence  ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR. KLPEEHARFYSAEISLALN
Template Known Secondary structure  TTSSTTB


B
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   300.........310.........320.........330......... 340.........350........
 
   478.480.........490.........500.........510.........520.........530.......
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Query Sequence  YLERNSFIHRDLAARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFN
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Template Sequence  YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSFCG. . TPNYIAPEILR
Template Known Secondary structure  TT
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GGG
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TT
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TT

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GGG

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   359360.........370.........380.........390.........400..... ....410......
 
   538.540.........550.........560.........570.........580.........590.......
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Query Sequence  YSRFSSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLHRPKLATKYLYEVM
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Template Sequence  GEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILEK. QIRIPRSMSVKAASVL
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   418.420.........430......... 440.........450......... 460.........470.....
 
   598.600.........610 ......
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Query Sequence  LRCWQERPEGRPS. . . . . . LEDLLR
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Template Sequence  KSFLNKDPKERLGCLPQTGFADIQG
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   485....490.........500.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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