Job Description P24604 Confidence 100.00% Date Tue Jul 30 13:00:36 BST 2013 Rank 230 Aligned Residues 247 % Identity 34% Template c1y6aA_ PDB info PDB header:transferase Chain: A: PDB Molecule:vascular endothelial growth factor receptor 2; PDBTitle: crystal structure of vegfr2 in complex with a 2-anilino-5-aryl-oxazole2 inhibitor Resolution 2.10 Å

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		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		G	F	S	Y	D	K	W	E	I	N	P	S	E	L	T	F	M	R	E	L	G	S	G	L	F	G	V	V	R	L	G	K	W	R	.	.	A	Q	Y	K	V	A	I	K	A	I	R	E	G	A	M	C	E	E	D	F	I	E	E	A
Query Conservation																																				.	.
Alig confidence																																				.	.														.	.
Template Conservation																																																			.	.
Template Sequence		P	Y	D	A	S	K	W	E	F	P	R	D	R	L	K	L	G	K	P	L	G	R	Q	V	I	E	A	D	A	F	G	I	D	K	T	A	T	C	R	T	V	A	V	K	M	L	T	H	S	.	.	E	H	R	A	L	M	S	E	L
Template Known Secondary structure									B			G	G	G																		S	T	T	S	S	S														.	.
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		819	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.			.	.	870	.	.	.	.	.	.
		414	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.							.	.	460	.	.	.	.	.
Predicted Secondary structure										.												.																										.	.	.	.	.	.
Query SS confidence										.												.																										.	.	.	.	.	.
Query Sequence		K	V	M	M	K	L	T	H	.	P	K	L	V	Q	L	Y	G	V	C	T	.	Q	Q	K	P	I	Y	I	V	T	E	F	M	E	R	G	C	L	L	N	F	L	R	Q	R	Q	.	.	.	.	.	.	G	H	F	S	R	D	M	L
Query Conservation										.												.																										.	.	.	.	.	.
Alig confidence										.												.																										.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	L	I	H	I	G	H	H	L	N	V	V	N	L	L	G	A	C	T	K	P	G	G	P	L	M	V	I	V	E	F	C	K	F	G	N	L	S	T	Y	L	R	S	K	R	N	E	F	V	P	Y	D	F	L	T	L	E	H	L
Template Known Secondary structure											T	T	B									S	S	S	S										T	T		B								T	T	T	S	B						B
Template Predicted Secondary structure
Template SS confidence
		885	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	M	C	Q	D	V	C	E	G	M	E	Y	L	E	R	N	S	F	I	H	R	D	L	A	A	R	N	C	L	V	N	E	A	G	V	V	K	V	S	D	F	G	M	A	R	Y	V	L	D	D	Q	Y	T	S	S	S	G	A	K
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	C	Y	S	F	Q	V	A	K	G	M	E	F	L	A	S	R	K	C	I	H	R	D	L	A	A	R	N	I	L	L	S	E	K	N	V	V	K	I	C	D	F	P	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																		T	T				S				G	G	G					G	G	G									G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.		.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		F	P	V	K	W	C	P	P	E	V	F	N	Y	S	R	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	I	F	T	E	G	R	M	P	F	E	K	N	.	T	N	Y	E	V	V	T	M	V	T	R	G	H	R	L	H
Query Conservation																																													.
Alig confidence		.	.	.	.																																								.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	W	M	A	P	E	T	I	F	D	R	V	Y	T	I	Q	S	D	V	W	S	F	G	V	L	L	W	E	I	F	S	L	G	A	S	P	Y	P	G	V	K	I	D	E	E	F	C	R	R	L	K	E	G	T	R	M	R
Template Known Secondary structure		.	.	.	.	G																													T	T	S			S	S	T	T				S										T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						1069	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	K	L	A	T	K	Y	L	Y	E	V	M	L	R	C	W	Q	E	R	P	E	G	R	P	S	L	E	D	L	L	R	T	I	D	E	L	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	D	Y	T	T	P	E	M	Y	Q	T	M	L	D	C	W	H	G	E	P	S	Q	R	P	T	F	S	E	L	V	E	H	L	G	N	L	L	Q
Template Known Secondary structure				T	T													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1125	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D