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Job DescriptionP24604
Confidence100.00%DateTue Jul 30 13:00:36 BST 2013
Rank97Aligned Residues255
% Identity34%Templatec1xkkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:epidermal growth factor receptor; PDBTitle: egfr kinase domain complexed with a quinazoline inhibitor-2 gw572016
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   364.....370.........380......... 390.........400.........410.........420..
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Query Sequence  INPSELTFMRELGSGLFGVVRLGKWR. AQYKVAIKAIREGAMCEEDFIEEAKVMMKLTHP
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Template Sequence  LKETEFKKIKVLGSGAFGTVYKGLWIPVKIPVAIKELRE. . KANKEILDEAYVMASVDNP
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   707..710.........720.........730.........740..... ....750.........760....
 
   423......430.........440.........450.........460.........470.........480..
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Query Sequence  KLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEGMEYLERN
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Template Sequence  HVCRLLGICLTSTV. QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR
Template Known Secondary structure  TB

SSS.

TT
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   773......780...... ...790.........800.........810.........820.........830.
 
   483......490.........500.........510.........520.........530.........540..
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Query Sequence  SFIHRDLAARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFNYSRFS
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Template Sequence  RLVHRDLAARNVLVKTPQHVKITDFGLAKLL. . . . . . . GAEEKVPIKWMALESILHRIYT
Template Known Secondary structure  T


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GGGTT


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   832.......840.........850.........860.. .......870.........880....
 
   543......550.........560.........570.........580.........590.........600..
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Query Sequence  SKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLHRPKLATKYLYEVMLRCWQ
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Template Sequence  HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM
Template Known Secondary structure  TTS

TTTTS
GGGT





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   893......900.........910.........920.........930.........940.........950..
 
   603......610.........620........
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Query Sequence  ERPEGRPSLEDLLRTIDELVECEETF
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Template Sequence  IDADSRPKFRELIIEFSKMARDPQRY
Template Known Secondary structure  SSGGGS

S
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   953......960.........970........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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