Phyre 2 alignment of P24604 with c2kcjA_

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Job Description | P24604
Confidence | 99.50% | Date | Tue Jul 30 13:00:36 BST 2013
Rank | 486 | Aligned Residues | 102
% Identity | 22% | Template | c2kcjA_
PDB info | PDB header:membrane protein | Chain: A: PDB Molecule:pleckstrin homology domain-containing family a | PDBTitle: solution structure of fapp1 ph domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | N | F | N | T | I | L | E | E | I | L | I | K | R | S | Q | Q | K | K | K | T | S | L | L | N | Y | K | E | R | L | C | V | L | P | K | S | V | L | S | Y | Y | E | . | G | R | A | E | K | K | Y | R | K | G | V | I | D | I | S | K | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | G | S | P | E | F | M | E | G | V | L | Y | K | W | T | N | Y | L | T | . | . | . | . | . | G | W | Q | P | R | W | F | V | L | D | N | G | I | L | S | Y | Y | D | S | Q | D | D | V | C | K | G | S | K | G | S | I | K | M | A | V | C
Template Known Secondary structure |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | S |  |  |  |  | G | G | G | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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