02/08/2013 01:40:49 : INFO  : Run start: Fri Aug  2 01:40:49 BST 2013
02/08/2013 01:40:49 : INFO  : Initialised job
02/08/2013 01:40:52 : INFO  : Initialised job:
Sequence
>batch____
MNFNTILEEILIKRSQQKKKTSLLNYKERLCVLPKSVLSYYEGRAEKKYRKGVIDISKIK
CVEIVKNDDGVIPCQNKFPFQVVHDANTLYIFAPSPQSRDRWVKKLKEEIKNNNNIMIKY
HPKFWADGSYQCCRQTEKLAPGCEKYNLFESSIRKTLPPAPEIKKRRPPPPIPPEEENTE
EIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKSNN
LDQYEWYCRNTNRSKAEQLLRTEDKEGGFMVRDSSQPGLYTVSLYTKFGGEGSSGFRHYH
IKETATSPKKYYLAEKHAFGSIPEIIEYHKHNAAGLVTRLRYPVSTKGKNAPTTAGFSYD
KWEINPSELTFMRELGSGLFGVVRLGKWRAQYKVAIKAIREGAMCEEDFIEEAKVMMKLT
HPKLVQLYGVCTQQKPIYIVTEFMERGCLLNFLRQRQGHFSRDMLLSMCQDVCEGMEYLE
RNSFIHRDLAARNCLVNEAGVVKVSDFGMARYVLDDQYTSSSGAKFPVKWCPPEVFNYSR
FSSKSDVWSFGVLMWEIFTEGRMPFEKNTNYEVVTMVTRGHRLHRPKLATKYLYEVMLRC
WQERPEGRPSLEDLLRTIDELVECEETFGR

02/08/2013 01:40:52 : INFO  : Checked sequence
02/08/2013 01:40:52 : INFO  : Finding homologues with PSI-BLAST
02/08/2013 01:40:52 : INFO  : PSI-BLAST 3 iterations
02/08/2013 01:45:45 : INFO  : PSI-BLAST 5 iterations
02/08/2013 01:51:26 : INFO  : Finished PSI-BLAST
02/08/2013 01:51:26 : INFO  : Running Buildali to generate a3m file
02/08/2013 03:16:54 : INFO  : Converting to HMM
02/08/2013 03:17:35 : INFO  : Calibrating HMM
02/08/2013 03:17:52 : INFO  : Searching HMM database
02/08/2013 03:31:38 : INFO  : Finished buildali
02/08/2013 03:31:38 : INFO  : Predicting secondary structure
02/08/2013 03:31:42 : INFO  : Predicted secondary structure (PSI-Pred)
02/08/2013 03:31:42 : INFO  : Predicting Disordered regions
02/08/2013 03:31:42 : INFO  : Predicted Disorder (Disopred)
02/08/2013 03:31:42 : INFO  : Running memsat_svm check
02/08/2013 03:33:25 : INFO  : Globular protein
02/08/2013 03:33:25 : INFO  : Predicted Transmembrane (memsat_svm) ID '0c49007f439466a0'
02/08/2013 03:33:26 : INFO  : Initialising fold library search
02/08/2013 03:33:26 : INFO  : Initialised search input
02/08/2013 03:33:26 : INFO  : Building Ensemble models
02/08/2013 03:33:26 : INFO  : Building hh.c2fo0A_.model.1.pdb
02/08/2013 03:33:27 : INFO  : Building hh.c1oplA_.model.2.pdb
02/08/2013 03:33:29 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0c49007f439466a0/hh.c1oplA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0c49007f439466a0/c1oplA_.2.pdb
02/08/2013 03:33:29 : INFO  : Building hh.c1y57A_.model.3.pdb
02/08/2013 03:33:30 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0c49007f439466a0/hh.c1y57A_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0c49007f439466a0/c1y57A_.3.pdb
02/08/2013 03:33:31 : INFO  : Building hh.c2h8hA_.model.4.pdb
02/08/2013 03:33:32 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0c49007f439466a0/hh.c2h8hA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0c49007f439466a0/c2h8hA_.4.pdb
02/08/2013 03:33:32 : INFO  : Building hh.c1k9aB_.model.5.pdb
02/08/2013 03:33:33 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0c49007f439466a0/hh.c1k9aB_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0c49007f439466a0/c1k9aB_.5.pdb
02/08/2013 03:33:34 : INFO  : Building hh.c2c0iA_.model.6.pdb
02/08/2013 03:33:35 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0c49007f439466a0/hh.c2c0iA_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0c49007f439466a0/c2c0iA_.6.pdb
02/08/2013 03:33:36 : INFO  : Building hh.c3o96A_.model.7.pdb
02/08/2013 03:33:36 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0c49007f439466a0/hh.c3o96A_.model.7.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0c49007f439466a0/c3o96A_.119.pdb
02/08/2013 03:33:37 : INFO  : Building c2fo0A_.1.pdb
02/08/2013 03:33:39 : INFO  : Building c1oplA_.2.pdb
02/08/2013 03:33:44 : INFO  : Building c1y57A_.3.pdb
02/08/2013 03:33:45 : INFO  : Building c2h8hA_.4.pdb
02/08/2013 03:33:45 : INFO  : Building c1k9aB_.5.pdb
02/08/2013 03:33:46 : INFO  : Building c2c0iA_.6.pdb
02/08/2013 03:33:47 : INFO  : Building c4fl2A_.7.pdb
02/08/2013 03:33:48 : INFO  : Building c2ozoA_.8.pdb
02/08/2013 03:33:49 : INFO  : Building c3cblA_.9.pdb
02/08/2013 03:33:51 : INFO  : Building c2j0kB_.10.pdb
02/08/2013 03:33:51 : INFO  : Building d1qcfa3.11.pdb
02/08/2013 03:33:52 : INFO  : Building d1opja_.12.pdb
02/08/2013 03:33:53 : INFO  : Building c4im2A_.13.pdb
02/08/2013 03:33:54 : INFO  : Building c3zzwA_.14.pdb
02/08/2013 03:33:55 : INFO  : Building d1qpca_.15.pdb
02/08/2013 03:33:56 : INFO  : Building d1k2pa_.16.pdb
02/08/2013 03:33:57 : INFO  : Building c3qa8H_.17.pdb
02/08/2013 03:34:02 : INFO  : Building c2ivsA_.18.pdb
02/08/2013 03:34:03 : INFO  : Building c3pfqA_.19.pdb
02/08/2013 03:34:04 : INFO  : Building c3g0eA_.20.pdb
02/08/2013 03:34:30 : INFO  : Finished HH model building
02/08/2013 03:34:30 : WARN  : Set python to /bmm/www/servers/phyre2/bin//python2.7/2.7.2/bin/python2.7
02/08/2013 03:34:50 : INFO  : html domain output complete ID '0c49007f439466a0'
02/08/2013 06:06:54 : INFO  : Run end  : Fri Aug  2 06:06:54 BST 2013
