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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank249Aligned Residues243
% Identity23%Templatec4l45A_
PDB info PDB header:transferaseChain: A: PDB Molecule:rps6kb1 protein; PDBTitle: crystal structures of human p70s6k1-t389e
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   224.....230.........240.........250... ......260..... ....270....
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Query Sequence  QDEWERPRSEFVLRRKLGEGFFGEVWEGLW. . . . LGSIPVAVKVIK. . . . . SADMKLADL
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Template Sequence  RGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT
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   58.60.........70.........80.........90.........100.........110.......
 
   275....280.........290.........300.........310.........320.........330....
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Query Sequence  TKEIEALKSLRHERLIRLHAICSLGEPVYIVTELMGKGNLQVYLGSSEGKALSLPHLLGF
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Template Sequence  KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE. . GIFMEDTACFY
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   118.120.........130.........140.........150.........160.... .....170.....
 
   335....340.........350.........360.........370.........380.........390....
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Query Sequence  ACQVAEGMSYLEERRVVHRDLAARNVLVGDDLTCKVADFGLARLLKDDVYSPSSGSKIPV
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Template Sequence  LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC. . . . . . . . . . . . KESGTI
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   176...180.........190.........200.........210....... ..220...
 
   395....400.........410.........420.........430.........440.........450....
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Query Sequence  KWTAPEAANYRVFSQKSDVWSFGILLYEVFTYGQCPYEGMTNHETLQQISRGYRLPRPAV
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Template Sequence  EYMAPEILMRSGHNRAVDWWSLGALMYDMLT. GAPPFTGENRKKTIDKILK. CKLNLPPY
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   235....240.........250.........260..... ....270.........280.... .....290..
 
   455....460.........470.... .....480..
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Query Sequence  CPAEVYVLMVECWKGSPEER. . . . . PTFAILRE
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Template Sequence  LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA
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   293......300.........310.........320.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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