Job Description Q62270 Confidence 100.00% Date Tue Jul 30 13:00:53 BST 2013 Rank 200 Aligned Residues 243 % Identity 13% Template c3vwaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cytoplasmic export protein 1; PDBTitle: crystal structure of cex1p Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		234	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure								.																				.
Query SS confidence								.																				.
Query Sequence		F	V	L	R	R	K	.	L	G	E	G	F	F	G	E	V	W	E	G	L	W	L	G	S	I	P	.	V	A	V	K	V	I	K	S	A	D	M	K	L	A	D	L	T	K	E	I	E	A	L	K	S	L	R	H	E	R	L	I	R
Query Conservation								.																				.
Alig confidence								.																				.
Template Conservation
Template Sequence		Y	T	I	E	E	T	A	I	T	E	T	A	L	W	Q	C	F	D	G	T	R	K	A	D	S	L	P	V	T	V	F	K	A	K	R	S	P	E	N	E	S	L	I	L	N	A	V	H	K	S	K	I	L	K	I	P	G	L	C	T
Template Known Secondary structure						S	S		S				S	S									T	T	T													T	T	T																	T	T	B
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		292	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		L	H	A	I	C	S	L	.	G	E	P	V	Y	I	V	T	E	L	M	G	K	G	N	L	Q	V	Y	L	G	S	S	E	G	K	A	L	S	L	P	H	L	L	G	F	A	C	Q	V	A	E	G	M	S	Y	L	E	E	R	R	V
Query Conservation									.
Alig confidence									.																								.	.	.	.																						.	.
Template Conservation																																	.	.	.	.																						.	.
Template Sequence		V	L	E	T	F	D	S	D	P	Q	S	T	F	I	V	T	E	R	V	V	P	F	P	W	D	N	L	G	S	L	S	.	.	.	.	Q	N	K	F	G	V	E	L	G	I	S	Q	L	L	A	T	L	G	F	L	K	.	.	N	F
Template Known Secondary structure								S	S	T	T	S													G	G	G					T	.	.	.	.	T																			T	T	.	.	T
Template Predicted Secondary structure																																	.	.	.	.																						.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	R	D	L	A	A	R	N	V	L	V	G	D	D	L	T	C	K	V	A	D	F	G	L	A	R	L	L	K	D	D	V	Y	S	P	S	S	G	S	K	I	P	V	K	W	T	A	P	E	A	A	N	Y	R	V	F	S	Q	K
Query Conservation
Alig confidence																															.
Template Conservation																															.
Template Sequence		V	L	G	T	L	S	K	D	S	V	F	I	N	I	K	G	E	W	V	L	F	G	L	E	L	C	S	S	K	.	E	G	L	S	A	F	E	F	A	S	R	A	R	S	Y	Y	N	I	I	G	S	Q	L	P	C	E	D	P	N	T
Template Known Secondary structure							S	G	G	G					T	T	S								T	T				S	.	T	T																		T						S		T	T	T
Template Predicted Secondary structure																															.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.											450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	V	W	S	F	G	I	L	L	Y	E	V	F	T	Y	G	Q	C	P	Y	E	G	M	T	N	H	E	T	L	Q	Q	I	S	R	G	Y	R	L	.	.	.	.	.	.	.	.	.	.	P	R	P	A	V	C	P	A	E	V	Y
Query Conservation																																									.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		I	D	S	X	G	L	G	L	L	I	K	S	L	X	A	.	P	S	C	L	P	K	D	W	I	V	N	V	N	X	I	S	D	G	K	I	T	I	E	N	F	R	K	R	L	E	N	T	E	T	W	R	S	N	P	L	I	N	F	Y
Template Known Secondary structure															S		.	T	T	T	S		G	G	G									T	T		S												S
Template Predicted Secondary structure																	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	M	V	E	C	W	K	G	S	P	E	E	R	P	T	F	A	I	L	R	E	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	L	R	E	L	H	I	K	D	P	Q	G	K	L	V	V	X	S	N	L	E	N	L
Template Known Secondary structure						T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D