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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank199Aligned Residues235
% Identity25%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RPRSEFVLRRKLGEGFFGEVWEGLWLGSIP. VAVKVIKSADMKLADLTKEIEALKSLRHE
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Template Sequence  HDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHP
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   16...20.........30.........40.........50.........60.........70.....
 
   288.290.........300.........310.........320.........330.........340.......
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Query Sequence  RLIRLHAICSLGEPVYIVTELMGKGNLQVYLGSSEGKALSLPHLLGFACQVAEGMSYLEE
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Template Sequence  NIVRFKEVILTPTHLAIVMEYASGGELFERICNA. . GRFSEDEARFFFQQLISGVSYAHA
Template Known Secondary structure  TB


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   76...80.........90.........100......... 110.........120.........130...
 
   348.350.........360..... ....370.........380.........390.........400.....
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Query Sequence  RRVVHRDLAARNVLVGDD. . LTCKVADFGLARLLKDDVYSPSSGSKIPVKWTAPEAANYR
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Template Sequence  MQVAHRDLKLENTLLDGSPAPRLKIADFGY. . . . . . . . . . . . . . . . TPAYIAPEVLLKKE
Template Known Secondary structure  S
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GGG


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   134.....140.........150.........160... ......170.......
 
   406...410.........420.........430.........440...... ...450.........460
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Query Sequence  VFSQKSDVWSFGILLYEVFTYGQCPYEGMTNHETLQQISRG. . . . . YRLPRPAVCPAEVY
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Template Sequence  YDGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR
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   193......200.........210.. .......220.........230.........240.........250.
 
   461........470.........480..
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Query Sequence  VLMVECWKGSPEERPTFAILRE
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Template Sequence  HLISRIFVADPAKRISIPEIRN
Template Known Secondary structure  S
SSGGGS

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   252.......260.........270...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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