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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank252Aligned Residues237
% Identity24%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   232.......240.........250..... ....260..... ....270.........280.... .
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Query Sequence  SEFVLRRKLGEGFFGEVWEGLWLG. SIPVAVKVIK. . . . SADMKLADLTKEIEALKSL. R
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN
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TTTTT

TTTTT
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   353......360.........370.........380.........390.........400.........410..
 
   286...290.........300.........310.........320.........330.........340.....
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Query Sequence  HERLIRLHAICSLGEPVYIVTELMGKGNLQVYLGSSEGKALSLPHLLGFACQVAEGMSYL
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Template Sequence  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR. . RFDEARARFYAAEIISALMFL
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   413......420.........430.........440......... 450.........460.........470
 
   346...350.........360.........370.........380.........390.........400.....
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Query Sequence  EERRVVHRDLAARNVLVGDDLTCKVADFGLARLLKDDVYSPSSGSKIPVKWTAPEAANYR
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Template Sequence  HDKGIIYRDLKLDNVLLDHEGHCKLADFGMC. . . . . . . . . . KEGICGTPDYIAPEILQEM
Template Known Secondary structure  TT
B




GGG
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TT
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GGG

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   471........480.........490.........500. ........510.........520
 
   406...410.........420.........430.........440.........450.........460.....
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Query Sequence  VFSQKSDVWSFGILLYEVFTYGQCPYEGMTNHETLQQISRGYRLPRPAVCPAEVYVLMVE
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Template Sequence  LYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILND. EVVYPTWLHEDATGILKS
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   530.........540......... 550.........560......... 570.........580.......
 
   466...470...... ...480..
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Query Sequence  CWKGSPEERPT. . . . . . FAILRE
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Template Sequence  FMTKNPTMRLGSLTQGGEHAILR
Template Known Secondary structure  T
SSGGGSTTSGGGT
TT
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   588.590.........600.........610
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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