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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank47Aligned Residues247
% Identity24%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   231........240.........250.........260........ .270.........280.......
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Query Sequence  RSEFVLRRKLGEGFFGEVWEGLWLGSIPVAVKVIKSAD. . . MKLADLTKEIEALKSLRHE
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Template Sequence  TEEYQLFEELGKGSVVRRCVKVLAG. QEYAAMIINTKKLSARDHQKLEREARICRLLKHP
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TTTT.S
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BT
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   10.........20.........30.... .....40.........50.........60........
 
   288.290.........300.........310.........320.........330.........340.......
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Query Sequence  RLIRLHAICSLGEPVYIVTELMGKGNLQVYLGSSEGKALSLPHLLGFACQVAEGMSYLEE
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Template Sequence  NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR. . EYYSEADASHCIQQILEAVLHCHQ
Template Known Secondary structure  TB


SS


B

B
..S


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   71........80.........90.........100.... .....110.........120........
 
   348.350.........360....... ..370.........380.........390.........400....
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Query Sequence  RRVVHRDLAARNVLVGDDLT. . . CKVADFGLARLLKDDVYSPSSGSKIPVKWTAPEAANY
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Template Sequence  MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPG. YLSPEVLRK
Template Known Secondary structure  TT
B



SSTTSBSSTT




SS
B


TT

B


S
S
GG.G

TT
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   129130.........140.........150.........160.........170........ .180.......
 
   405....410.........420.........430.........440...... ...450.........460.
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Query Sequence  RVFSQKSDVWSFGILLYEVFTYGQCPYEGMTNHETLQQISRG. . . YRLPRPAVCPAEVYV
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Template Sequence  DPYGKPVDLWACGVILYILLV. GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD
Template Known Secondary structure 

B
T.SS
S


SST




TTTTTTS
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   188.190.........200........ .210.........220.........230.........240......
 
   462.......470.........480..
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Query Sequence  LMVECWKGSPEERPTFAILRE
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Template Sequence  LINKMLTINPSKRITAAEALK
Template Known Secondary structure  S
SSTTTS

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   247..250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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