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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank22Aligned Residues260
% Identity26%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   217..220.........230.........240.........250........ .260........ .270.
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Query Sequence  IPQIPLVQDEWERPRSEFVLRRKLGEGFFGEVWEGLWLGSIP. VAVKVIKSAD. . . . MKL
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Template Sequence  SQEEGEYFNVPVPPLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDV
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TTGGGT





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   279280.........290.........300.........310.........320.........330........
 
   272.......280.... .....290.........300.........310.........320.........330
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Query Sequence  ADLTKEIEALKSL. RHERLIRLHAICSLGEPVYIVTELMGKGNLQVYLGSSEGKALSLPH
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Template Sequence  ECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG. . RFKEPH
Template Known Secondary structure  T
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B
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   385....390.........400.........410.........420.........430...... ...440..
 
   331........340.........350.........360.........370.........380.........390
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Query Sequence  LLGFACQVAEGMSYLEERRVVHRDLAARNVLVGDDLTCKVADFGLARLLKDDVYSPSSGS
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Template Sequence  AVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKFC.
Template Known Secondary structure  TS




STT
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TT



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   443......450.........460.........470.........480.........490.........500.
 
   391........400.........410.........420.........430.........440.........450
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Query Sequence  KIPVKWTAPEAANYRVFSQKSDVWSFGILLYEVFTYGQCPYEGMTNHETLQQISRGYRLP
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Template Sequence  . GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEH. NVA
Template Known Secondary structure  .S
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T


BST.SS
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   503......510.........520.........530...... ...540.........550...... ...
 
   451........460.........470...... ...480..
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Query Sequence  RPAVCPAEVYVLMVECWKGSPEERPT. . . . . FAILRE
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Template Sequence  YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE
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   560.........570.........580.........590......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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