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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank92Aligned Residues239
% Identity24%Templatec3p23B_
PDB info PDB header:hydrolase, transferaseChain: B: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the human kinase and rnase domains in complex2 with adp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RPRSEFVLRRKLGEGFFGE. VWEGLWLGSIPVAVKVIKSADMKLADLTKEIEALKSL. RH
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Template Sequence  VGKISFCPKDVLGHGAEGTIVYRGMFDN. RDVAVKRILPECFS. . FADREVQLLRESDEH
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   566...570.........580.........590... ......600....... ..610.........620..
 
   287..290.........300.........310.........320.........330.........340......
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Query Sequence  ERLIRLHAICSLGEPVYIVTELMGKGNLQVYLGSSEGKALSLPHLLGFACQVAEGMSYLE
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Template Sequence  PNVIRYFCTEKDRQFQYIAIELCA. ATLQEYVEQK. DFAHLGLEPITLLQQTTSGLAHLH
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   623......630.........640...... ...650...... ...660.........670.........680
 
   347..350.........360....... ..370.........380.........390.........400.
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Query Sequence  ERRVVHRDLAARNVLVGDDLT. . . . . CKVADFGLARLLKDDVYSPSSGSKIPVKWTAPEA
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Template Sequence  SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAP. . . . . . . . . . GTEGWIAPEM
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SGGG


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   681........690.........700.........710.........720 .........730
 
   402.......410.........420.........430.........440....... ..450.........
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Query Sequence  ANYRVFSQKSDVWSFGILLYEVFTYGQCPYEGMTNHETLQQISRGY. . RLPRPAVCPAEV
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Template Sequence  LSEENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIA
Template Known Secondary structure  GT




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   743......750.........760.........770.........780.........790.........800..
 
   460.........470.........480..
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Query Sequence  YVLMVECWKGSPEERPTFAILRE
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Template Sequence  RELIEKMIAMDPQKRPSAKHVLK
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   806...810.........820........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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