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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank187Aligned Residues241
% Identity28%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   232.......240.........250........ .260...... ...270.........280........
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Query Sequence  SEFVLRRKLGEGFFGEVWEGLWLGSIP. VAVKVIKS. . ADMKLADLTKEIEALKSLRHER
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPN
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TTT

B


T


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   74.....80.........90.........100.........110.........120.........130...
 
   289290.........300.........310.........320.........330.........340........
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Query Sequence  LIRLHAICSLGEPVYIVTELMGKGNLQVYLGSSEGKALSLPHLLGFACQVAEGMSYLEER
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Template Sequence  IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK. . RFSEHDAARIIKQVFSGITYMHKH
Template Known Secondary structure  B


SS



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   135....140.........150.........160........ .170.........180.........190..
 
   349350.........360.........370.........380.........390.........400........
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Query Sequence  RVVHRDLAARNVLVGDDLTCKVADFGLARLLKDDVYSPSSGSKIPVKWTAPEAANYRVFS
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Template Sequence  NIVHRDLKPENILLESKEKDCDIKII. . . . . . DFGLSTCFQQNTTAYYIAPE. VLRGTYD
Template Known Secondary structure  T


S


GGGSSSSTT


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GGG

GG.GGGT


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   193......200.........210........ .220.........230........ .240.....
 
   409410.........420.........430.........440...... ...450.........460.....
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Query Sequence  QKSDVWSFGILLYEVFTYGQCPYEGMTNHETLQQISRG. . . YRLPRPAVCPAEVYVLMVE
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Template Sequence  EKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK
Template Known Secondary structure  .SS
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SGGGGGS
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   253......260......... 270.........280.........290.........300.........310.
 
   466...470.........480..
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Query Sequence  CWKGSPEERPTFAILRE
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Template Sequence  MLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
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   312.......320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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