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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank101Aligned Residues237
% Identity27%Templatec3hztA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium-dependent protein kinase 3; PDBTitle: crystal structure of toxoplasma gondii cdpk3, tgme49_105860
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   232.......240.........250.... .....260........ .270.........280......
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Query Sequence  SEFVLRRKLGEGFFGEVWEGLWL. GSIPVAVKVIKSAD. . . . MKLADLTKEIEALKSLRH
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Template Sequence  DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH
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   74.....80.........90.........100.........110.........120.........130...
 
   287..290.........300.........310.........320.........330.........340......
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Query Sequence  ERLIRLHAICSLGEPVYIVTELMGKGNLQVYLGSSEGKALSLPHLLGFACQVAEGMSYLE
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Template Sequence  PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR. . QKFSEVDAAVIMKQVLSGTTYLH
Template Known Secondary structure  TTB


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   134.....140.........150.........160........ .170.........180.........190.
 
   347..350.........360.. .......370.........380.........390.........400...
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Query Sequence  ERRVVHRDLAARNVLV. . . GDDLTCKVADFGLARLLKDDVYSPSSGSKIPVKWTAPEAAN
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Template Sequence  KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF. . . . . . . . . . . EVGTAYYIAPEVL
Template Known Secondary structure  TT


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GGGSSS
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   192.......200.........210.........220....... ..230.........240
 
   404.....410.........420.........430.........440...... ...450.........460
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Query Sequence  YRVFSQKSDVWSFGILLYEVFTYGQCPYEGMTNHETLQQISRG. . . YRLPRPAVCPAEVY
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Template Sequence  RKKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAK
Template Known Secondary structure  TT


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TTTTTTS
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   249250.........260.........270 .........280.........290.........300.......
 
   461........470.........480..
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Query Sequence  VLMVECWKGSPEERPTFAILRE
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Template Sequence  QLVKLMLTYEPSKRISAEEALN
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SSTTTS

T
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   308.310.........320.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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