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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank220Aligned Residues256
% Identity22%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   231........240.........250..... ....260...... ...270.........280......
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Query Sequence  RSEFVLRRKLGEGFFGEVWEGLWLG. SIPVAVKVIKS. . . ADMKLADLTKEIEALKSLRH
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Template Sequence  QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQKDVERIKTEVRLMKKLHH
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   7..10.........20.........30.........40.........50.........60......
 
   287..290.........300.........310.........
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Query Sequence  ERLIRLHAICSLGEPVYIVTELMGKGNLQVYLG. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE
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   70.........80.........90.........100.........110.........120.........
 
   320.........330.........340.........350.........360.. ......
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Query Sequence  . . . . . . . . . SSEGKALSLPHLLGFACQVAEGMSYLEERRVVHRDLAARNVLV. . GDDLTC
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Template Sequence  EAINGSIFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI
Template Known Secondary structure  S




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   130.........140.........150.........160.........170.........180.........
 
   369370.........380.........390.........400.... .....410.........420......
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Query Sequence  KVADFGLARLLKDDVYSPSSGSKIPVKWTAPEAANY. . RVFSQKSDVWSFGILLYEVFTY
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Template Sequence  KLVDFGLSKEFYKLNNGAGTPY. . . . . FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM.
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   192.......200.........210... ......220.........230.........240.....
 
   427..430.........440...... ...450.........460.........470.........480..
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Query Sequence  GQCPYEGMTNHETLQQISRG. . . YRLPRPAVCPAEVYVLMVECWKGSPEERPTFAILRE.
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Template Sequence  GAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH
Template Known Secondary structure  SS
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TTSGGGGGS
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   254.....260.........270.........280.........290.........300.........310...
 
   483......490..
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Query Sequence  . KLNAINRRLH
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Template Sequence  PWISQFSDKIY
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   314.....320....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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