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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank188Aligned Residues290
% Identity15%Templatec3e7eA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitotic checkpoint serine/threonine-protein kinase bub1; PDBTitle: structure and substrate recruitment of the human spindle checkpoint2 kinase bub
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   194.....200.........210.........220.........230.........240.........250...
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Query Sequence  LDALLAYYKTNWKLIQNPLLQPCIPQIPLVQDEWERPRSEFVLRRKLGEGFFGEVWEGLW
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Template Sequence  IFKLLSGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQ
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   747..750.........760.........770.........780.........790.........800......
 
   254.....260.........270.........280 .........290.........300.........310..
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Query Sequence  LGSIPVAVKVIKSADMKLADLTKEIEA. LKSLRHERLIRLHAICSLGEPVYIVTELMGKG
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Template Sequence  NK. QKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYG
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S
GGGGGGB


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   814. ....820.........830.........840.........850.........860.........870..
 
   313...... 320.........330.........340.........350.........360.. ..
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Query Sequence  NLQVYLG. . . SSEGKALSLPHLLGFACQVAEGMSYLEERRVVHRDLAARNVLV. . . . . GD
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Template Sequence  TLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQ
Template Known Secondary structure  BTSTT
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TTT



SGGG
GGGT

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   873......880.........890.........900.........910.........920.........930..
 
   365....370.........380. ........390.........400.........410.........420...
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Query Sequence  DLTCKVADFGLARLLKD. DVYSPSSGSKIPVKWTAPEAANYRVFSQKSDVWSFGILLYEV
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Template Sequence  SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCM
Template Known Secondary structure 
TT


TT
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TT

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TT

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   939940.........950.........960.........970.........980.........990........
 
   424.....430.........440.........450.........460.........470.... .....480..
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Query Sequence  FTYGQCPYEGMTNHETLQQISRGYRLPRPAVCPAEVYVLMVECWKGSPEER. PTFAILRE
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Template Sequence  LF. GTYMKVKNEGG. . . . . ECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ
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   9991000 .........1010. ........1020.........1030.........1040.........1050..
 
   483......490
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Query Sequence  KLNAINRR
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Template Sequence  KLKKVFQQ
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   1053......1060
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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