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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank35Aligned Residues252
% Identity22%Templatec3c4wB_
PDB info PDB header:transferaseChain: B: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of g protein coupled receptor kinase 1 bound to atp2 and magnesium chloride at 2.7a
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   228.230.........240.........250........ .260........ .270.........280..
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Query Sequence  ERPRSEFVLRRKLGEGFFGEVWEGLWLGSIP. VAVKVIKSAD. . . . MKLADLTKEIEALK
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Template Sequence  PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA
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   181........190.........200.........210.........220.........230.........240
 
   283......290.........300.........310.........320 .........330.........340
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Query Sequence  SLRHERLIRLHAICSLGEPVYIVTELMGKGNLQVYLGS. . SEGKALSLPHLLGFACQVAE
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Template Sequence  KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS
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   241........250.........260.........270.........280.........290.........300
 
   341........350.........360.........370.........380.........390.........400
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Query Sequence  GMSYLEERRVVHRDLAARNVLVGDDLTCKVADFGLARLLKDDVYSPSSGSKIPVKWTAPE
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Template Sequence  GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP. GFMAPE
Template Known Secondary structure  TT




GGG
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   301........310.........320.........330.........340.........350... ......
 
   401........410.........420.........430.... .....440.........450......
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Query Sequence  AANYRVFSQKSDVWSFGILLYEVFTYGQCPYEGM. . . . TNHETLQQISRGYRLPRPAVCP
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Template Sequence  LLLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGEKVENKELKQRVLEQA. VTYPDKFS
Template Known Secondary structure  TT

B
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   360.........370.........380.... .....390.........400......... 410.......
 
   457..460.........470.... .....480..
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Query Sequence  AEVYVLMVECWKGSPEER. . . . . PTFAILRE
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Template Sequence  PASKDFCEALLQKDPEKRLGFRDGSCDGLRT
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SSGGGS


BTTBSTTGGG
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   418.420.........430.........440........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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