Return to main results Retrieve Phyre Job Id

Job DescriptionQ62270
Confidence99.94%DateTue Jul 30 13:00:53 BST 2013
Rank340Aligned Residues112
% Identity30%Templatec2ysxA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:signaling inositol polyphosphate phosphatase PDBTitle: solution structure of the human ship sh2 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140.........150........
Predicted Secondary structure 

































Query SS confidence 



























































Query Sequence  GPPSTGLVPVTYLAKATPEPPSDQPWYFSGISRAQAQQLLLSPANAPGAFLIRPSESSIG
Query Conservation    
  
 

 
 
            

 
 
 
  

  
       
 



 
    
Alig confidence 









...............


















.














Template Conservation          
 ...............



 


  

 

    .  
 



 
     
Template Sequence  SSGSSGMVPC. . . . . . . . . . . . . . . WNHGNITRSKAEELLSRTG. KDGSFLVRASESISR
Template Known Secondary structure 



SS


S...............SS


.
TT
SS
TT
Template Predicted Secondary structure 







...............









.








Template SS confidence 



























































   2.......10. ........20.........30 .........40.....
 
   159160.........170.........180...... ...190.........200.........210...
Predicted Secondary structure 








.....

















Query SS confidence 



























. . . . .


























Query Sequence  GYSLSVRAQAKVCHYRICMAPSGSLYLQ. . . . . EGQLFPSLDALLAYYKTNWKLIQNPLL
Query Conservation   
 


     
 
  
     
     .....    
 

  

  
   
  
   
 
Alig confidence 



























.....


























Template Conservation     


     
 
  
                    
 

  

  
      
   
 
Template Sequence  AYALCVLYRNCVYTYRILPNEDDKFTVQASEGVSMRFFTKLDQLIEFYKKENMGLVTHLQ
Template Known Secondary structure  S
SS

TTS


S
SSS


BSSTTSSSSSSSS


Template Predicted Secondary structure 


























Template SS confidence 



























































   46...50.........60.........70.........80.........90.........100.....
 
   214.....220......
Predicted Secondary structure 












Query SS confidence 












Query Sequence  QPCIPQIPLVQDE
Query Conservation   
           
Alig confidence 












Template Conservation   


         
Template Sequence  YPVPLEEEDTGDD
Template Known Secondary structure 








S
Template Predicted Secondary structure 












Template SS confidence 












   106...110........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D