Job Description Q62270 Confidence 99.60% Date Tue Jul 30 13:00:53 BST 2013 Rank 430 Aligned Residues 77 % Identity 22% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		D	Q	P	W	Y	F	S	G	I	S	R	A	Q	A	Q	Q	L	L	L	S	P	A	N	A	P	G	A	F	L	I	R	P	S	E	S	S	I	G	G	Y	S	L	S	V	R	A	Q	A	K	V	.	C	H	Y	R	I	C	M	A	P
Query Conservation																																																				.
Alig confidence								.														.	.	.											.																	.						.	.
Template Conservation								.														.	.	.											.																							.	.
Template Sequence		K	H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	.	.	S	T	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	.	.	E	E
Template Known Secondary structure		G	S	T	T			.														.	.	.	S	S									.	S	S	T	T										T	T								.	.
Template Predicted Secondary structure								.														.	.	.											.																							.	.
Template SS confidence
		791	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.				810	.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.			.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	S	L	Y	L	Q	E	G	Q	L	F	P	S	L	D	A	L	L	A	Y	Y	K	T	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	S	E	H	Y	T	C	S	N	K	H	F	E	D	I	D	E	V	I	S	V	Y	V	R	P
Template Known Secondary structure			S	S					T	T				S	S								T
Template Predicted Secondary structure
Template SS confidence
		844	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D