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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank231Aligned Residues256
% Identity25%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   232.......240.........250.........260...... ...270.........280.........290
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Query Sequence  SEFVLRRKLGEGFFGEVWEGLWLGSIPVAVKVIKS. ADMKLADLTKEIEALKSLRHERLI
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Template Sequence  NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLV
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   3940.........50.........60.........70.........80.........90........
 
   291........300.........310......... 320.........330.........340........
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Query Sequence  RLHAICSLGEPVYIVTELMGKGNLQVYLG. . SSEGKALSLPHLLGFACQVAEGMSYLEER
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Template Sequence  SLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR
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   99100.........110.........120.........130.........140.........150........
 
   349350.........360.........370.........380.........390.........400........
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Query Sequence  RVVHRDLAARNVLVGDDLTCKVADFGLARLLKDDVYSPSSGSKIPVKWTAPEAANYRVFS
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Template Sequence  AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLVVKGTLG. YIDPEYFIKGRLT
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   159160.........170.........180.........190.........200.... .....210.......
 
   409410.........420.........430.........440..... ....450..
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Query Sequence  QKSDVWSFGILLYEVFTYGQCPYEGMTNHETLQQISR. . . . . . . . . . . . . . . . GYRLPRP
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Template Sequence  EKSDVYSFGVVLFEVLC. ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR
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   220.........230...... ...240.........250.........260.........270........
 
   453......460.........470.........480.........
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Query Sequence  AVCPAEVYVLMVECWKGSPEERPTFAILREKLNAINR
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Template Sequence  PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR
Template Known Secondary structure  T
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   279280.........290.........300.........310.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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