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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank298Aligned Residues229
% Identity26%Templatec2qkrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cdc2-like cdk2/cdc28 like protein kinase; PDBTitle: cryptosporidium parvum cyclin-dependent kinase cgd5_25102 with indirubin 3'-monoxime bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.........270.........280.........290.....
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Query Sequence  LRRKLGEGFFGEVWEGLWLGSIPVAVKVIKSADMKLADLTKEIEALKSLRHERLIRLHAI
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Template Sequence  MEKYLEKVGEGVVYKAKDSQ. RIVALKRIS. . . . . . . TAIREISLLKELHHPNIVSLIDV
Template Known Secondary structure  S
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   20.........30......... 40........ .50.........60.........70.
 
   296...300.........310.........320.........330.........340.........350.....
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Query Sequence  CSLGEPVYIVTELMGKGNLQVYLGSSEGKALSLPHLLGFACQVAEGMSYLEERRVVHRDL
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Template Sequence  IHSECL. TLVFEFMEKDLKKVLDENK. . TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDL
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   88.90... ......100.........110.. .......120.........130.........140....
 
   356...360.........370.........380.........390.........400.........410.....
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Query Sequence  AARNVLVGDDLTCKVADFGLARLLKDDVYSPSSGSKIPVKWTAPEAANYRVFSQKSDVWS
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Template Sequence  KPQNLLI. NSDALKLADFGLARAFGIPVRVVTLWY. . . . . RAPDVLMGSKKYSTSVDIWS
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GGG.






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   146...150.. .......160.........170......... 180.........190.........
 
   416...420.........430.........440.........450..
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Query Sequence  FGILLYEVFTYGQCPYEGMTNHETLQQISRGYRLPRP. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  IGCIFAEMIT. GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKK
Template Known Secondary structure  .SS
S


SSGGG



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   206...210..... ....220.........230.........240.........250.........260....
 
   453......460.........470.........480..
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Query Sequence  . . . . . . AVCPAEVYVLMVECWKGSPEERPTFAILRE
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Template Sequence  PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN
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STT

S
S
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   265....270.........280.........290.........300
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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