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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank89Aligned Residues249
% Identity25%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   232.......240.........250..... ....260.... .....270.........280.........
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Query Sequence  SEFVLRRKLGEGFFGEVWEGLWLG. SIPVAVKVI. KSADMKLADLTKEIEALKSLRHERL
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Template Sequence  QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI
Template Known Secondary structure  TTTTT

TTT
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   26...30.........40.........50.........60.........70.........80.....
 
   290.........300.........310.........320.........330.........340.........
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Query Sequence  IRLHAICSLGEPVYIVTELMGKGNLQVYLGSSEGKALSLPHLLGFACQVAEGMSYLEERR
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Template Sequence  IRLYETFEDNTDIYLVMELCTGGELFERVVHK. . RVFRESDAARIMKDVLSAVAYCHKLN
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SGGGGGTTT..SS

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   86...90.........100.........110....... ..120.........130.........140...
 
   350.........360.. .......370.........380.........390.........400......
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Query Sequence  VVHRDLAARNVLV. . . GDDLTCKVADFGLARLLKDDVYSPSSGSKIPVKWTAPEAANYRV
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Template Sequence  VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG. . KMMRTKVGTPYYVSPQVLEGL.
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SGGGSSSSTT




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B



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   144.....150.........160.........170......... 180.........190.........200
 
   407..410.........420.........430.........440.........450.. .......460....
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Query Sequence  FSQKSDVWSFGILLYEVFTYGQCPYEGMTNHETLQQISRGYRLPRP. . AVCPAEVYVLMV
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Template Sequence  YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIR
Template Known Secondary structure  B
TT.SS
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   201........210......... 220.........230.........240.........250.........
 
   465....470.........480.. ....
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Query Sequence  ECWKGSPEERPTFAILRE. . KLNA
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Template Sequence  RLLTKSPKQRITSLQALEHEWFEK
Template Known Secondary structure  S
SSTTTS

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   261........270.........280....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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