Return to main results Retrieve Phyre Job Id

Job DescriptionQ62270
Confidence99.53%DateTue Jul 30 13:00:53 BST 2013
Rank476Aligned Residues74
% Identity22%Templatec2enmA_
PDB info PDB header:endocytosisChain: A: PDB Molecule:sorting nexin-9; PDBTitle: solution structure of the sh3 domain from mouse sorting2 nexin-9
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60......... 70.........80.........90.........100.........
Predicted Secondary structure 












.






















Query SS confidence 


















.







































Query Sequence  SFPAPRARLFRALYDFTAR. CAEELSVSRGDRLYALKEEGDYIFAQRLSGPPSTGLVPVT
Query Conservation      
      


     .   

 
 


   

      
        
  
 

 
Alig confidence 


















.







































Template Conservation 
          




 
     



  

 
 
        
       
  
  
  
Template Sequence  SGSSGMATKARVMYDFAAEPGNNELTVTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPTD
Template Known Secondary structure 

SS
S
SS




TTSSB



TT
S

SSS
TT

TT
Template Predicted Secondary structure 





























Template SS confidence 



























































   3......10.........20.........30.........40.........50.........60..
 
   110.........120....
Predicted Secondary structure 










Query SS confidence 














Query Sequence  YLAKATPEPPSDQPW
Query Conservation   
            
Alig confidence 














Template Conservation 


 
      
 
 
Template Sequence  YVEILPNDGKDPFSC
Template Known Secondary structure  T









Template Predicted Secondary structure 










Template SS confidence 














   63......70.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D