Return to main results Retrieve Phyre Job Id

Job DescriptionQ62270
Confidence99.80%DateTue Jul 30 13:00:53 BST 2013
Rank411Aligned Residues119
% Identity22%Templatec2cr4A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:sh3 domain-binding protein 2; PDBTitle: solution structure of the sh2 domain of human sh3bp2 protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120.........130.........140 .........150......
Predicted Secondary structure 


















....










Query SS confidence 







































. . . .















Query Sequence  PSTGLVPVTYLAKATPEPPSDQPWYFSGISRAQAQQLLLS. . . . PANAPGAFLIRPSESS
Query Conservation 
  
 

 
 
            

 
 
 
  

  
  ....     
 



 
   
Alig confidence 

















.....
















....















Template Conservation                 
  .....        
  
        
    

 



 
   
Template Sequence  GSSGSSGEDYEKVPLPNS. . . . . VFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSSTK
Template Known Secondary structure 










S
SS
TT.....TB
S


STTS


TT

SST
Template Predicted Secondary structure 












.....





















Template SS confidence 



























































   1........10........ .20.........30.........40.........50.....
 
   157.. 160.........170.........180.........190.........200...... ...210...
Predicted Secondary structure 


.


















..






Query SS confidence 


.














































. .






Query Sequence  IGG. YSLSVRAQAKVCHYRICMAPSGSLYLQEGQLFPSLDALLAYYKTNWK. . LIQNPLL
Query Conservation   
 .
 


     
 
  
     
         
 

  

  
   
 .. 
   
 
Alig confidence 


.


















.


























..






Template Conservation   
    

      


  
   .           
 

 


 

   

       

Template Sequence  SGKVLVVWDETSNKVRNYRIFEK. DSKFYLEGEVLFVSVGSMVEHYHTHVLPSHQSLLLR
Template Known Secondary structure  T
TTTT


.TTSSSS
SSTTS

SSSSS



Template Predicted Secondary structure 





.
















Template SS confidence 



























































   56...60.........70........ .80.........90.........100.........110....
 
   214.....220.....
Predicted Secondary structure 











Query SS confidence 











Query Sequence  QPCIPQIPLVQD
Query Conservation   
          
Alig confidence 











Template Conservation   
 
    
 

Template Sequence  HPYGYTSGPSSG
Template Known Secondary structure  SBSS



TTT
Template Predicted Secondary structure 











Template SS confidence 











   115....120......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D