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Job DescriptionQ62270
Confidence100.00%DateTue Jul 30 13:00:53 BST 2013
Rank145Aligned Residues248
% Identity23%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   229230.........240.........250..... ....260..... ....270.........280...
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Query Sequence  RPRSEFVLRRKLGEGFFGEVWEGLWLG. SIPVAVKVIK. . . . SADMKLADLTKEIEALKS
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ
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STT
SSTTT

GGG

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   240.........250.........260.........270.........280.........290.........
 
   284.....290.........300.........310.........320.........330.........340..
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Query Sequence  . LRHERLIRLHAICSLGEPVYIVTELMGKGNLQVYLGSSEGKALSLPHLLGFACQVAEGM
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Template Sequence  ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ. . RKLPEEHARFYSAEISLAL
Template Known Secondary structure  TTSSTTB


B
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   300.........310.........320.........330........ .340.........350.......
 
   343......350.........360.........370.........380.........390.........400..
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Query Sequence  SYLEERRVVHRDLAARNVLVGDDLTCKVADFGLARLLKDDVYSPSSGSKIPVKWTAPEAA
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Template Sequence  NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSFCGTPN. . YIAPEIL
Template Known Secondary structure  TT
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GGG
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TT
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TT

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S
GG..G

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   358.360.........370.........380.........390.........400........ .410.....
 
   403......410.........420.........430.........440.........450.........460..
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Query Sequence  NYRVFSQKSDVWSFGILLYEVFTYGQCPYEGMTNHETLQQISRGYRLPRPAVCPAEVYVL
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Template Sequence  RGEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILE. KQIRIPRSMSVKAASV
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   417..420.........430......... 440.........450........ .460.........470....
 
   463......470...... ...480..
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Query Sequence  MVECWKGSPEERPT. . . . . . FAILRE
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Template Sequence  LKSFLNKDPKERLGCLPQTGFADIQG
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SSSTTSTTTSTTT
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   484.....490.........500.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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