Return to main results Retrieve Phyre Job Id

Job DescriptionQ8R4L0
Confidence98.77%DateTue Jul 30 13:18:27 BST 2013
Rank262Aligned Residues53
% Identity26%Templatec2js0A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: solution structure of second sh3 domain of adaptor nck
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80........
Predicted Secondary structure 




































Query SS confidence 





















































Query Sequence  TAVALGSFPAGEQARLSLRLGEPLTIISEDGDWWTVQSEVSGREYHMPSVYVAK
Query Conservation    





 
    


   

   

      
      

  
 

   
  
Alig confidence 





































.














Template Conservation   
 
 
 
      


   

 
 
       
    .  
  
  
  

  
Template Sequence  PAYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWRGS. YNGQVGWFPSNYVTE
Template Known Secondary structure 
S
B


STTB

B
TT

SSS.TTGGGS
Template Predicted Secondary structure 
















.



Template SS confidence 





















































   6...10.........20.........30.........40... ......50........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D