Job Description Q8R4L0 Confidence 99.90% Date Tue Jul 30 13:18:27 BST 2013 Rank 70 Aligned Residues 131 % Identity 29% Template c2c9wA_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:suppressor of cytokine signaling 2; PDBTitle: crystal structure of socs-2 in complex with elongin-b and2 elongin-c at 1.9a resolution Resolution 1.9 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	V	A	H	G	W	L	Y	E	G	L	S	R	E	K	A	E	E	L	L	L	L	P	G	N	P	G	G	A	F	L	I	R	E	S	Q	T	R	R	G	C	Y	S	L	S	V	R	L	S	R	P	A	S	W	D	R	I	R	H
Query Conservation
Alig confidence																								.	.																												.	.	.	.	.
Template Conservation																								.	.																												.	.	.	.	.
Template Sequence		E	L	G	Q	T	G	W	Y	W	G	S	M	T	V	N	E	A	K	E	K	L	K	.	.	E	A	P	E	G	T	F	L	I	R	D	S	S	H	S	D	Y	L	L	T	I	S	V	K	T	S	A	.	.	.	.	.	G	P	T	N
Template Known Secondary structure						T	S		B		T	T											T	.	.	T	S		T	T									S	T	T		S								T	T	.	.	.	.	.
Template Predicted Secondary structure																								.	.																												.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		Y	R	I	Q	R	L	D	N	G	W	L	Y	.	.	.	.	.	.	I	S	P	R	L	T	F	P	S	L	H	A	L	V	E	H	Y	S	E	L	A	D	G	I	C	C	P	L	R	E	P	C	V	L	Q	K	L	G	P	L	P	G
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																									.	.						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	I	E	Y	Q	D	G	K	F	R	L	D	S	I	I	C	V	K	S	K	L	K	Q	F	D	S	V	V	H	L	I	D	Y	Y	V	Q	M	C	K	H	L	.	.	Y	L	T	K	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T						T	T	T	T	T	G	G	G				B	S													T				.	.					B	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	T	P	P	P	V	T	V	P	T	S	S	L	N	W	K	K	L	D	R	S	L	L	F	L	E	A	P	A	S	G	E	A	S	L	L	S	E	G	L	R	E	S	L	S	S	Y	I	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	L	Y	T	S	A	P	S	L	Q	H	L	C	R	L	T	I	N	K	C	T	.	.	.	.	.	G	A	I	W	G	L	P	L	P	T	R	L	K	D	Y	L	E
Template Known Secondary structure		.	.	.	.	.	.	.	.			S	S																	.	.	.	.	.	S		G	G	G	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
										156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D