 |
| Job Description | Q8R4L0 | | Confidence | 96.56% | Date | Tue Jul 30 13:18:27 BST 2013 |
| Rank | 316 | Aligned Residues | 53 |
| % Identity | 26% | Template | c1kjwA_ |
| PDB info |
PDB header:neuropeptide | Chain: A: PDB Molecule:postsynaptic density protein 95; |
PDBTitle: sh3-guanylate kinase module from psd-95
|
| Resolution | 1.80 Å |
|
 |
|   |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
|
|
. | . | 80 | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
| Query Sequence |   |
K | V | T | A | V | A | L | G | S | F | P | A | G | E | . |
. |
. |
. |
. |
Q | A | R | L | S | L | R | L | G | E | P | L | T | I | I | S | E | . |
D | G | D | W | W | T | V | Q | S | E | V | S | G | R | . |
. |
. |
. |
E | Y | H | M | P |
| Query Conservation |   |
  |   |   |   |
|
|
|
|
|
|   |
|   |   | . | . | . | . | . |   |   |
|
|
|   |   |   |
|
|   |   |   |
|
|   |   | . |   |   |   |   |
|   |   |   |   |   |   |
|
|   | . | . | . | . |   |
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| Template Conservation |   |
  |
|
|
|
|
|   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
| Template Sequence |   |
G | F | Y | I | R | A | L | F | D | Y | D | K | T | K | D | C | G | F | L | S | Q | A | L | S | F | R | F | G | D | V | L | H | V | I | D | A | G | D | E | E | W | W | Q | A | R | R | V | H | S | D | S | E | T | D | D | I | G | F | I | P |
| Template Known Secondary structure |   |
|  |  |  |  |  | S | S |
| B |
|  |  |  |  |  |
|
|
| S | S | B |
|
| B |
| T | T |
|  |  |  |  |  |  |
|
| S | S | S |  |  |  |  |  |  |
|
| S | S |
|
|
| S |
|
|  |  |  |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
83 | . | . |
| Predicted Secondary structure |   |
|
|
|
| Query SS confidence |   |
|
|
|
| Query Sequence |   |
S | V | Y |
| Query Conservation |   |
  |   |   |
| Alig confidence |   |
|
|
|
| Template Conservation |   |
|   |   |
| Template Sequence |   |
S | K | R |
| Template Known Secondary structure |   |
|  |  |
| Template Predicted Secondary structure |   |
|  |  |
| Template SS confidence |   |
|
|
|
|   |   |
490 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|