01/08/2013 13:20:34 : INFO  : Run start: Thu Aug  1 13:20:34 BST 2013
01/08/2013 13:20:34 : INFO  : Initialised job
01/08/2013 13:20:34 : INFO  : Initialised job:
Sequence
>batch____
MGSLSSRGKTSSPSPSSSGPDQEPVSMQPERHKVTAVALGSFPAGEQARLSLRLGEPLTI
ISEDGDWWTVQSEVSGREYHMPSVYVAKVAHGWLYEGLSREKAEELLLLPGNPGGAFLIR
ESQTRRGCYSLSVRLSRPASWDRIRHYRIQRLDNGWLYISPRLTFPSLHALVEHYSELAD
GICCPLREPCVLQKLGPLPGKDTPPPVTVPTSSLNWKKLDRSLLFLEAPASGEASLLSEG
LRESLSSYISLAEDPLDDA

01/08/2013 13:20:34 : INFO  : Checked sequence
01/08/2013 13:20:34 : INFO  : Finding homologues with PSI-BLAST
01/08/2013 13:20:34 : INFO  : PSI-BLAST 3 iterations
01/08/2013 13:22:04 : INFO  : PSI-BLAST 5 iterations
01/08/2013 13:23:49 : INFO  : Finished PSI-BLAST
01/08/2013 13:23:51 : INFO  : Running Buildali to generate a3m file
01/08/2013 13:29:36 : INFO  : Converting to HMM
01/08/2013 13:29:38 : INFO  : Calibrating HMM
01/08/2013 13:29:46 : INFO  : Searching HMM database
01/08/2013 13:36:51 : INFO  : Finished buildali
01/08/2013 13:36:51 : INFO  : Predicting secondary structure
01/08/2013 13:36:52 : INFO  : Predicted secondary structure (PSI-Pred)
01/08/2013 13:36:52 : INFO  : Predicting Disordered regions
01/08/2013 13:36:53 : INFO  : Predicted Disorder (Disopred)
01/08/2013 13:36:53 : INFO  : Running memsat_svm check
01/08/2013 13:40:10 : INFO  : Globular protein
01/08/2013 13:40:10 : INFO  : Predicted Transmembrane (memsat_svm) ID '0a7e693b9aaa9644'
01/08/2013 13:40:10 : INFO  : Initialising fold library search
01/08/2013 13:40:10 : INFO  : Initialised search input
01/08/2013 13:40:10 : INFO  : Building Ensemble models
01/08/2013 13:40:11 : INFO  : Building hh.c1y57A_.model.1.pdb
01/08/2013 13:40:11 : INFO  : Building hh.c2c0iA_.model.2.pdb
01/08/2013 13:40:11 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0a7e693b9aaa9644/hh.c2c0iA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0a7e693b9aaa9644/c2c0iA_.2.pdb
01/08/2013 13:40:12 : INFO  : Building hh.c2h8hA_.model.3.pdb
01/08/2013 13:40:12 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0a7e693b9aaa9644/hh.c2h8hA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0a7e693b9aaa9644/c2h8hA_.3.pdb
01/08/2013 13:40:12 : INFO  : Building hh.c2fo0A_.model.4.pdb
01/08/2013 13:40:13 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0a7e693b9aaa9644/hh.c2fo0A_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0a7e693b9aaa9644/c2fo0A_.4.pdb
01/08/2013 13:40:13 : INFO  : Building hh.c1oplA_.model.5.pdb
01/08/2013 13:40:13 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0a7e693b9aaa9644/hh.c1oplA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0a7e693b9aaa9644/c1oplA_.5.pdb
01/08/2013 13:40:13 : INFO  : Building hh.c1x27F_.model.6.pdb
01/08/2013 13:40:14 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0a7e693b9aaa9644/hh.c1x27F_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0a7e693b9aaa9644/c1x27F_.6.pdb
01/08/2013 13:40:15 : INFO  : Building hh.c2yt6A_.model.7.pdb
01/08/2013 13:40:15 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0a7e693b9aaa9644/hh.c2yt6A_.model.7.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0a7e693b9aaa9644/c2yt6A_.102.pdb
01/08/2013 13:40:15 : INFO  : Building c1y57A_.1.pdb
01/08/2013 13:40:16 : INFO  : Building c2c0iA_.2.pdb
01/08/2013 13:40:19 : INFO  : Building c2h8hA_.3.pdb
01/08/2013 13:40:19 : INFO  : Building c2fo0A_.4.pdb
01/08/2013 13:40:19 : INFO  : Building c1oplA_.5.pdb
01/08/2013 13:40:20 : INFO  : Building c1x27F_.6.pdb
01/08/2013 13:40:20 : INFO  : Building c3nhnA_.7.pdb
01/08/2013 13:40:21 : INFO  : Building c1k9aB_.8.pdb
01/08/2013 13:40:21 : INFO  : Building c2ablA_.9.pdb
01/08/2013 13:40:22 : INFO  : Building c1g83A_.10.pdb
01/08/2013 13:40:22 : INFO  : Building d1a81a1.11.pdb
01/08/2013 13:40:23 : INFO  : Building d2oq1a1.12.pdb
01/08/2013 13:40:23 : INFO  : Building d1lkka_.13.pdb
01/08/2013 13:40:24 : INFO  : Building c2oq1A_.14.pdb
01/08/2013 13:40:24 : INFO  : Building d1qcfa2.15.pdb
01/08/2013 13:40:24 : INFO  : Building d1f2fa_.16.pdb
01/08/2013 13:40:25 : INFO  : Building d1bkla_.17.pdb
01/08/2013 13:40:25 : INFO  : Building c2dlyA_.18.pdb
01/08/2013 13:40:25 : INFO  : Building d2oq1a2.19.pdb
01/08/2013 13:40:26 : INFO  : Building d1g83a2.20.pdb
01/08/2013 13:40:38 : INFO  : Finished HH model building
01/08/2013 13:40:38 : WARN  : Set python to /bmm/www/servers/phyre2/bin//python2.7/2.7.2/bin/python2.7
01/08/2013 13:40:44 : INFO  : html domain output complete ID '0a7e693b9aaa9644'
01/08/2013 13:56:45 : INFO  : Run end  : Thu Aug  1 13:56:45 BST 2013
